Hb_005701_080

Information

Type -
Description -
Location Contig5701: 61968-68047
Sequence    

Annotation

kegg
ID rcu:RCOM_1596550
description ATP binding protein, putative
nr
ID XP_002510482.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q8S950
description Kinesin-like protein NACK1 OS=Nicotiana tabacum GN=NACK1 PE=1 SV=1
trembl
ID B9R839
description Kinesin-like protein OS=Ricinus communis GN=RCOM_1596550 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin-like protein nack1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005701_080 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_003120_050 0.1599025274 - - PREDICTED: uncharacterized protein LOC105635312 [Jatropha curcas]
3 Hb_028207_040 0.1693823091 - - PREDICTED: beta-hexosaminidase 2 [Jatropha curcas]
4 Hb_000866_210 0.1696705878 transcription factor TF Family: BES1 PREDICTED: beta-amylase 7 isoform X1 [Jatropha curcas]
5 Hb_001205_030 0.174544475 transcription factor TF Family: zf-HD hypothetical protein POPTR_0007s12970g [Populus trichocarpa]
6 Hb_022693_050 0.1774930383 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
7 Hb_006111_030 0.1812037492 - - PREDICTED: phospholipase A(1) LCAT3 isoform X1 [Jatropha curcas]
8 Hb_000364_040 0.1816414587 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF010-like [Jatropha curcas]
9 Hb_000953_050 0.1818235857 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105629451 [Jatropha curcas]
10 Hb_000672_030 0.1865253586 - - PREDICTED: uncharacterized protein LOC105628931 isoform X1 [Jatropha curcas]
11 Hb_002897_050 0.1877967326 - - PREDICTED: uncharacterized protein LOC105649158 [Jatropha curcas]
12 Hb_046117_010 0.1879694588 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Jatropha curcas]
13 Hb_011631_010 0.1896748517 - - PREDICTED: uncharacterized protein LOC105641795 [Jatropha curcas]
14 Hb_012082_010 0.1939755932 - - PREDICTED: transcription factor GTE4 isoform X1 [Jatropha curcas]
15 Hb_000084_240 0.1942745074 - - PREDICTED: F-box/kelch-repeat protein At1g57790-like [Jatropha curcas]
16 Hb_003097_100 0.194792789 - - probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [Jatropha curcas]
17 Hb_000465_080 0.194943173 - - PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Jatropha curcas]
18 Hb_002107_060 0.1958787847 - - PREDICTED: uncharacterized protein LOC105635312 [Jatropha curcas]
19 Hb_005499_010 0.1969778435 transcription factor TF Family: TRAF Regulatory protein NPR1, putative [Ricinus communis]
20 Hb_001525_010 0.197452616 - - PREDICTED: uncharacterized protein LOC105638298 [Jatropha curcas]

Gene co-expression network

sample Hb_005701_080 Hb_005701_080 Hb_003120_050 Hb_003120_050 Hb_005701_080--Hb_003120_050 Hb_028207_040 Hb_028207_040 Hb_005701_080--Hb_028207_040 Hb_000866_210 Hb_000866_210 Hb_005701_080--Hb_000866_210 Hb_001205_030 Hb_001205_030 Hb_005701_080--Hb_001205_030 Hb_022693_050 Hb_022693_050 Hb_005701_080--Hb_022693_050 Hb_006111_030 Hb_006111_030 Hb_005701_080--Hb_006111_030 Hb_000465_080 Hb_000465_080 Hb_003120_050--Hb_000465_080 Hb_001141_360 Hb_001141_360 Hb_003120_050--Hb_001141_360 Hb_003120_050--Hb_028207_040 Hb_003494_060 Hb_003494_060 Hb_003120_050--Hb_003494_060 Hb_001865_060 Hb_001865_060 Hb_003120_050--Hb_001865_060 Hb_000084_240 Hb_000084_240 Hb_003120_050--Hb_000084_240 Hb_000953_050 Hb_000953_050 Hb_028207_040--Hb_000953_050 Hb_001525_010 Hb_001525_010 Hb_028207_040--Hb_001525_010 Hb_003078_050 Hb_003078_050 Hb_028207_040--Hb_003078_050 Hb_001369_570 Hb_001369_570 Hb_028207_040--Hb_001369_570 Hb_000069_230 Hb_000069_230 Hb_028207_040--Hb_000069_230 Hb_002897_050 Hb_002897_050 Hb_000866_210--Hb_002897_050 Hb_052764_030 Hb_052764_030 Hb_000866_210--Hb_052764_030 Hb_009486_160 Hb_009486_160 Hb_000866_210--Hb_009486_160 Hb_011631_010 Hb_011631_010 Hb_000866_210--Hb_011631_010 Hb_003055_140 Hb_003055_140 Hb_000866_210--Hb_003055_140 Hb_011249_060 Hb_011249_060 Hb_000866_210--Hb_011249_060 Hb_010921_030 Hb_010921_030 Hb_001205_030--Hb_010921_030 Hb_000925_160 Hb_000925_160 Hb_001205_030--Hb_000925_160 Hb_000345_200 Hb_000345_200 Hb_001205_030--Hb_000345_200 Hb_001205_030--Hb_003078_050 Hb_126380_010 Hb_126380_010 Hb_001205_030--Hb_126380_010 Hb_189208_020 Hb_189208_020 Hb_001205_030--Hb_189208_020 Hb_002835_250 Hb_002835_250 Hb_022693_050--Hb_002835_250 Hb_003097_100 Hb_003097_100 Hb_022693_050--Hb_003097_100 Hb_022693_050--Hb_010921_030 Hb_022693_050--Hb_000069_230 Hb_022693_050--Hb_003078_050 Hb_022693_050--Hb_003120_050 Hb_006111_030--Hb_001865_060 Hb_012725_040 Hb_012725_040 Hb_006111_030--Hb_012725_040 Hb_000071_140 Hb_000071_140 Hb_006111_030--Hb_000071_140 Hb_001258_150 Hb_001258_150 Hb_006111_030--Hb_001258_150 Hb_004032_310 Hb_004032_310 Hb_006111_030--Hb_004032_310 Hb_002485_040 Hb_002485_040 Hb_006111_030--Hb_002485_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0368145 0.227084 0.0613177 0.0237096 0.0453633 0.0238782
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0762559 0.0360042 0.0229392 0.0142843 0.0511671

CAGE analysis