Hb_005701_110

Information

Type -
Description -
Location Contig5701: 95117-99357
Sequence    

Annotation

kegg
ID csv:101208838
description abhydrolase domain-containing protein 4-like
nr
ID XP_012071978.1
description PREDICTED: probable 1-acylglycerol-3-phosphate O-acyltransferase [Jatropha curcas]
swissprot
ID Q0J0A4
description Probable 1-acylglycerol-3-phosphate O-acyltransferase OS=Oryza sativa subsp. japonica GN=Os09g0520200 PE=3 SV=3
trembl
ID A0A067KUD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04518 PE=4 SV=1
Gene Ontology
ID GO:0004623
description probable 1-acylglycerol-3-phosphate o-acyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49336: 95110-99269 , PASA_asmbl_49340: 100334-101609
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005701_110 0.0 - - PREDICTED: probable 1-acylglycerol-3-phosphate O-acyltransferase [Jatropha curcas]
2 Hb_012545_030 0.1211231666 - - Polyadenylate-binding protein RBP47C [Glycine soja]
3 Hb_001155_050 0.1252514858 - - PREDICTED: KH domain-containing protein SPIN1-like [Jatropha curcas]
4 Hb_000984_260 0.1453467494 - - ergosterol biosynthetic protein 28 [Jatropha curcas]
5 Hb_006120_150 0.146947646 - - invertase [Hevea brasiliensis]
6 Hb_015778_040 0.1498132152 - - PREDICTED: uncharacterized protein LOC105650695 [Jatropha curcas]
7 Hb_008768_020 0.1498307092 - - PREDICTED: uncharacterized protein LOC105639378 [Jatropha curcas]
8 Hb_002960_090 0.1508765722 - - protein with unknown function [Ricinus communis]
9 Hb_000046_310 0.1532911499 - - PREDICTED: inactive beta-amylase 9 [Jatropha curcas]
10 Hb_001221_580 0.1540258577 - - PREDICTED: recQ-mediated genome instability protein 1 [Jatropha curcas]
11 Hb_018790_050 0.1540926214 - - hypothetical protein CICLE_v10017858mg [Citrus clementina]
12 Hb_002217_190 0.1567466289 - - invertase [Hevea brasiliensis]
13 Hb_004452_090 0.1585835704 - - hypothetical protein JCGZ_12231 [Jatropha curcas]
14 Hb_001863_160 0.1586404553 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]
15 Hb_000529_040 0.1610819435 - - PREDICTED: uncharacterized protein LOC105641671 [Jatropha curcas]
16 Hb_031822_010 0.1629705022 - - PREDICTED: uncharacterized protein LOC103496015 [Cucumis melo]
17 Hb_001318_150 0.1652001221 - - PREDICTED: shaggy-related protein kinase alpha-like [Jatropha curcas]
18 Hb_011671_340 0.165205029 - - small GTPase [Hevea brasiliensis]
19 Hb_003670_030 0.1674810604 - - PREDICTED: probable calcium-binding protein CML35 [Jatropha curcas]
20 Hb_003147_070 0.1676292043 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_005701_110 Hb_005701_110 Hb_012545_030 Hb_012545_030 Hb_005701_110--Hb_012545_030 Hb_001155_050 Hb_001155_050 Hb_005701_110--Hb_001155_050 Hb_000984_260 Hb_000984_260 Hb_005701_110--Hb_000984_260 Hb_006120_150 Hb_006120_150 Hb_005701_110--Hb_006120_150 Hb_015778_040 Hb_015778_040 Hb_005701_110--Hb_015778_040 Hb_008768_020 Hb_008768_020 Hb_005701_110--Hb_008768_020 Hb_000421_230 Hb_000421_230 Hb_012545_030--Hb_000421_230 Hb_012545_030--Hb_006120_150 Hb_001511_030 Hb_001511_030 Hb_012545_030--Hb_001511_030 Hb_001318_150 Hb_001318_150 Hb_012545_030--Hb_001318_150 Hb_003147_070 Hb_003147_070 Hb_012545_030--Hb_003147_070 Hb_011671_340 Hb_011671_340 Hb_001155_050--Hb_011671_340 Hb_001155_050--Hb_015778_040 Hb_007426_220 Hb_007426_220 Hb_001155_050--Hb_007426_220 Hb_000818_120 Hb_000818_120 Hb_001155_050--Hb_000818_120 Hb_000589_170 Hb_000589_170 Hb_001155_050--Hb_000589_170 Hb_029253_010 Hb_029253_010 Hb_001155_050--Hb_029253_010 Hb_002960_090 Hb_002960_090 Hb_000984_260--Hb_002960_090 Hb_000007_430 Hb_000007_430 Hb_000984_260--Hb_000007_430 Hb_006210_020 Hb_006210_020 Hb_000984_260--Hb_006210_020 Hb_019863_030 Hb_019863_030 Hb_000984_260--Hb_019863_030 Hb_001728_020 Hb_001728_020 Hb_000984_260--Hb_001728_020 Hb_000123_240 Hb_000123_240 Hb_006120_150--Hb_000123_240 Hb_010891_020 Hb_010891_020 Hb_006120_150--Hb_010891_020 Hb_002042_170 Hb_002042_170 Hb_006120_150--Hb_002042_170 Hb_004208_140 Hb_004208_140 Hb_006120_150--Hb_004208_140 Hb_015778_040--Hb_000589_170 Hb_002534_130 Hb_002534_130 Hb_015778_040--Hb_002534_130 Hb_001729_020 Hb_001729_020 Hb_015778_040--Hb_001729_020 Hb_002686_150 Hb_002686_150 Hb_015778_040--Hb_002686_150 Hb_000098_180 Hb_000098_180 Hb_015778_040--Hb_000098_180 Hb_008768_020--Hb_003147_070 Hb_000529_280 Hb_000529_280 Hb_008768_020--Hb_000529_280 Hb_005181_160 Hb_005181_160 Hb_008768_020--Hb_005181_160 Hb_000057_140 Hb_000057_140 Hb_008768_020--Hb_000057_140 Hb_000025_370 Hb_000025_370 Hb_008768_020--Hb_000025_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.79186 21.851 43.3148 21.5322 1.30459 1.31056
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.02728 13.2688 7.38478 13.4125 6.4027

CAGE analysis