Hb_005725_020

Information

Type transcription factor
Description TF Family: bZIP
Location Contig5725: 3445-4419
Sequence    

Annotation

kegg
ID pop:POPTR_0008s01130g
description POPTRDRAFT_803082; hypothetical protein
nr
ID XP_012084912.1
description PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Jatropha curcas]
swissprot
ID Q9LES3
description ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1
trembl
ID A0A0A7CB47
description Basic leucine zipper protein OS=Jatropha curcas GN=bZIP PE=2 SV=1
Gene Ontology
ID GO:0003700
description abscisic acid-insensitive 5-like protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005725_020 0.0 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Jatropha curcas]
2 Hb_000487_100 0.0998090606 - - PREDICTED: protein unc-45 homolog A [Jatropha curcas]
3 Hb_080147_030 0.105323835 transcription factor TF Family: CPP PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X3 [Jatropha curcas]
4 Hb_003125_060 0.1135700348 - - PREDICTED: snurportin-1 [Jatropha curcas]
5 Hb_000107_530 0.1139640017 - - calcium-dependent protein kinase, putative [Ricinus communis]
6 Hb_000720_070 0.1171880703 transcription factor TF Family: HSF hypothetical protein JCGZ_20639 [Jatropha curcas]
7 Hb_000152_890 0.1187898923 - - hypothetical protein JCGZ_26265 [Jatropha curcas]
8 Hb_043668_010 0.1193974984 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
9 Hb_000116_280 0.1204128695 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
10 Hb_000685_080 0.1247889102 - - protein binding protein, putative [Ricinus communis]
11 Hb_005399_020 0.1257351005 - - hypothetical protein CISIN_1g022820mg [Citrus sinensis]
12 Hb_002133_030 0.1262121195 - - PREDICTED: diphthamide biosynthesis protein 1 [Jatropha curcas]
13 Hb_001575_080 0.1293370636 - - PREDICTED: villin-4-like [Jatropha curcas]
14 Hb_000270_780 0.1298680757 - - PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Jatropha curcas]
15 Hb_000367_290 0.1301871287 - - PREDICTED: uncharacterized protein LOC105640583 [Jatropha curcas]
16 Hb_000740_070 0.131103172 - - -
17 Hb_000152_560 0.1317588416 - - hypothetical protein JCGZ_26236 [Jatropha curcas]
18 Hb_000313_340 0.1345039638 - - DNA repair protein xp-E, putative [Ricinus communis]
19 Hb_089435_010 0.1368861959 - - PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Vitis vinifera]
20 Hb_003018_160 0.1387476631 - - PREDICTED: uncharacterized protein LOC105628876 [Jatropha curcas]

Gene co-expression network

sample Hb_005725_020 Hb_005725_020 Hb_000487_100 Hb_000487_100 Hb_005725_020--Hb_000487_100 Hb_080147_030 Hb_080147_030 Hb_005725_020--Hb_080147_030 Hb_003125_060 Hb_003125_060 Hb_005725_020--Hb_003125_060 Hb_000107_530 Hb_000107_530 Hb_005725_020--Hb_000107_530 Hb_000720_070 Hb_000720_070 Hb_005725_020--Hb_000720_070 Hb_000152_890 Hb_000152_890 Hb_005725_020--Hb_000152_890 Hb_000487_100--Hb_003125_060 Hb_000487_100--Hb_080147_030 Hb_000685_080 Hb_000685_080 Hb_000487_100--Hb_000685_080 Hb_000740_070 Hb_000740_070 Hb_000487_100--Hb_000740_070 Hb_005399_020 Hb_005399_020 Hb_000487_100--Hb_005399_020 Hb_003656_160 Hb_003656_160 Hb_080147_030--Hb_003656_160 Hb_010222_080 Hb_010222_080 Hb_080147_030--Hb_010222_080 Hb_004678_020 Hb_004678_020 Hb_080147_030--Hb_004678_020 Hb_001975_020 Hb_001975_020 Hb_080147_030--Hb_001975_020 Hb_080147_030--Hb_000740_070 Hb_002133_030 Hb_002133_030 Hb_003125_060--Hb_002133_030 Hb_003125_060--Hb_000685_080 Hb_027405_020 Hb_027405_020 Hb_003125_060--Hb_027405_020 Hb_023020_060 Hb_023020_060 Hb_003125_060--Hb_023020_060 Hb_007305_010 Hb_007305_010 Hb_003125_060--Hb_007305_010 Hb_000313_340 Hb_000313_340 Hb_000107_530--Hb_000313_340 Hb_007885_070 Hb_007885_070 Hb_000107_530--Hb_007885_070 Hb_000320_380 Hb_000320_380 Hb_000107_530--Hb_000320_380 Hb_000417_160 Hb_000417_160 Hb_000107_530--Hb_000417_160 Hb_002221_050 Hb_002221_050 Hb_000107_530--Hb_002221_050 Hb_015026_050 Hb_015026_050 Hb_000107_530--Hb_015026_050 Hb_002965_030 Hb_002965_030 Hb_000720_070--Hb_002965_030 Hb_001534_070 Hb_001534_070 Hb_000720_070--Hb_001534_070 Hb_013394_060 Hb_013394_060 Hb_000720_070--Hb_013394_060 Hb_027420_050 Hb_027420_050 Hb_000720_070--Hb_027420_050 Hb_002999_060 Hb_002999_060 Hb_000720_070--Hb_002999_060 Hb_000367_290 Hb_000367_290 Hb_000152_890--Hb_000367_290 Hb_004032_350 Hb_004032_350 Hb_000152_890--Hb_004032_350 Hb_004724_360 Hb_004724_360 Hb_000152_890--Hb_004724_360 Hb_000001_180 Hb_000001_180 Hb_000152_890--Hb_000001_180 Hb_005314_010 Hb_005314_010 Hb_000152_890--Hb_005314_010 Hb_000152_890--Hb_002133_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
120.667 86.6788 24.967 36.3087 163.701 95.4099
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.4113 33.1971 60.9246 20.5757 13.7759

CAGE analysis