Hb_005726_030

Information

Type -
Description -
Location Contig5726: 51410-51885
Sequence    

Annotation

kegg
ID rcu:RCOM_1622030
description Cationic peroxidase 2 precursor, putative (EC:1.11.1.7)
nr
ID KDO40361.1
description hypothetical protein CISIN_1g020511mg [Citrus sinensis]
swissprot
ID Q9XIV8
description Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1
trembl
ID A0A067DP22
description Peroxidase OS=Citrus sinensis GN=CISIN_1g020511mg PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase n1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005726_030 0.0 - - hypothetical protein CISIN_1g020511mg [Citrus sinensis]
2 Hb_061590_010 0.0012890217 - - hypothetical protein JCGZ_23475 [Jatropha curcas]
3 Hb_187247_010 0.0141598922 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
4 Hb_007337_010 0.0256324167 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
5 Hb_143766_040 0.0270785944 - - PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 [Jatropha curcas]
6 Hb_004981_020 0.0299871993 - - PREDICTED: uncharacterized protein LOC103706119 [Phoenix dactylifera]
7 Hb_007437_010 0.034830386 - - Polygalacturonase precursor, putative [Ricinus communis]
8 Hb_106528_020 0.0412636254 - - Cationic peroxidase 2 precursor [Theobroma cacao]
9 Hb_038238_010 0.0416297226 - - hypothetical protein POPTR_0001s30980g [Populus trichocarpa]
10 Hb_006415_020 0.0451665285 - - PREDICTED: nucleobase-ascorbate transporter 4-like [Jatropha curcas]
11 Hb_010358_010 0.061516928 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
12 Hb_126040_020 0.0649113684 - - -
13 Hb_000201_080 0.0698245117 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
14 Hb_000692_270 0.0711851053 - - PREDICTED: ornithine decarboxylase-like [Jatropha curcas]
15 Hb_153208_010 0.0727027403 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
16 Hb_002944_020 0.0732839468 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
17 Hb_001604_140 0.0744307635 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
18 Hb_000828_030 0.0758702454 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
19 Hb_004190_030 0.076081535 - - unnamed protein product [Vitis vinifera]
20 Hb_020141_020 0.076514836 - - -

Gene co-expression network

sample Hb_005726_030 Hb_005726_030 Hb_061590_010 Hb_061590_010 Hb_005726_030--Hb_061590_010 Hb_187247_010 Hb_187247_010 Hb_005726_030--Hb_187247_010 Hb_007337_010 Hb_007337_010 Hb_005726_030--Hb_007337_010 Hb_143766_040 Hb_143766_040 Hb_005726_030--Hb_143766_040 Hb_004981_020 Hb_004981_020 Hb_005726_030--Hb_004981_020 Hb_007437_010 Hb_007437_010 Hb_005726_030--Hb_007437_010 Hb_061590_010--Hb_187247_010 Hb_061590_010--Hb_007337_010 Hb_061590_010--Hb_143766_040 Hb_061590_010--Hb_004981_020 Hb_061590_010--Hb_007437_010 Hb_187247_010--Hb_007337_010 Hb_187247_010--Hb_143766_040 Hb_187247_010--Hb_004981_020 Hb_106528_020 Hb_106528_020 Hb_187247_010--Hb_106528_020 Hb_007337_010--Hb_143766_040 Hb_007337_010--Hb_004981_020 Hb_126040_020 Hb_126040_020 Hb_007337_010--Hb_126040_020 Hb_143766_040--Hb_004981_020 Hb_143766_040--Hb_126040_020 Hb_004981_020--Hb_126040_020 Hb_006415_020 Hb_006415_020 Hb_007437_010--Hb_006415_020 Hb_038238_010 Hb_038238_010 Hb_007437_010--Hb_038238_010 Hb_007437_010--Hb_187247_010 Hb_007437_010--Hb_106528_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.80806 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 123.258 0

CAGE analysis