Hb_005731_050

Information

Type -
Description -
Location Contig5731: 62304-68146
Sequence    

Annotation

kegg
ID fve:101295838
description membrane-anchored ubiquitin-fold protein 4-like
nr
ID KDP41802.1
description hypothetical protein JCGZ_26820 [Jatropha curcas]
swissprot
ID Q9LSD8
description Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana GN=MUB4 PE=1 SV=1
trembl
ID A0A067L066
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26820 PE=4 SV=1
Gene Ontology
ID GO:0005515
description membrane-anchored ubiquitin-fold protein 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49474: 62388-68773
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005731_050 0.0 - - hypothetical protein JCGZ_26820 [Jatropha curcas]
2 Hb_000960_060 0.0524026774 - - PREDICTED: ADP-ribosylation factor 1-like 2 [Jatropha curcas]
3 Hb_004108_070 0.0575990916 - - PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Jatropha curcas]
4 Hb_000111_380 0.0767096647 - - PREDICTED: cilia- and flagella-associated protein 20 [Jatropha curcas]
5 Hb_002863_050 0.0773561274 - - aldose 1-epimerase, putative [Ricinus communis]
6 Hb_033594_120 0.0784622194 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 2 [Jatropha curcas]
7 Hb_003428_030 0.0784687936 - - tRNA, putative [Ricinus communis]
8 Hb_014720_120 0.0789023368 - - Phosphoenolpyruvate/phosphate translocator 1, chloroplastic -like protein [Gossypium arboreum]
9 Hb_004116_060 0.0793911702 - - PREDICTED: nuclear pore complex protein NUP88 [Jatropha curcas]
10 Hb_003416_010 0.0838313304 - - PREDICTED: 26S proteasome non-ATPase regulatory subunit 13 homolog B [Malus domestica]
11 Hb_009694_010 0.08417886 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002739_050 0.0843822847 - - PREDICTED: uncharacterized aarF domain-containing protein kinase 1 isoform X2 [Jatropha curcas]
13 Hb_001140_370 0.0845590993 - - PREDICTED: uncharacterized protein LOC105648463 [Jatropha curcas]
14 Hb_000815_320 0.0856404432 - - PREDICTED: vesicle transport v-SNARE 12-like isoform X2 [Jatropha curcas]
15 Hb_006693_020 0.0861454219 - - PREDICTED: frataxin, mitochondrial [Gossypium raimondii]
16 Hb_024071_020 0.0864365121 - - PREDICTED: uncharacterized protein LOC105639166 [Jatropha curcas]
17 Hb_003929_250 0.0868394283 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]
18 Hb_001157_020 0.0869031531 - - PREDICTED: uncharacterized protein LOC105649844 isoform X1 [Jatropha curcas]
19 Hb_000227_080 0.0873210006 - - conserved hypothetical protein [Ricinus communis]
20 Hb_011344_210 0.0879730429 - - PREDICTED: probable calcium-binding protein CML13 [Jatropha curcas]

Gene co-expression network

sample Hb_005731_050 Hb_005731_050 Hb_000960_060 Hb_000960_060 Hb_005731_050--Hb_000960_060 Hb_004108_070 Hb_004108_070 Hb_005731_050--Hb_004108_070 Hb_000111_380 Hb_000111_380 Hb_005731_050--Hb_000111_380 Hb_002863_050 Hb_002863_050 Hb_005731_050--Hb_002863_050 Hb_033594_120 Hb_033594_120 Hb_005731_050--Hb_033594_120 Hb_003428_030 Hb_003428_030 Hb_005731_050--Hb_003428_030 Hb_000960_060--Hb_003428_030 Hb_000960_060--Hb_033594_120 Hb_001828_190 Hb_001828_190 Hb_000960_060--Hb_001828_190 Hb_028227_020 Hb_028227_020 Hb_000960_060--Hb_028227_020 Hb_000093_160 Hb_000093_160 Hb_000960_060--Hb_000093_160 Hb_006693_020 Hb_006693_020 Hb_004108_070--Hb_006693_020 Hb_000317_390 Hb_000317_390 Hb_004108_070--Hb_000317_390 Hb_000815_320 Hb_000815_320 Hb_004108_070--Hb_000815_320 Hb_012286_030 Hb_012286_030 Hb_004108_070--Hb_012286_030 Hb_002375_070 Hb_002375_070 Hb_004108_070--Hb_002375_070 Hb_000111_380--Hb_004108_070 Hb_002601_110 Hb_002601_110 Hb_000111_380--Hb_002601_110 Hb_000656_170 Hb_000656_170 Hb_000111_380--Hb_000656_170 Hb_001140_370 Hb_001140_370 Hb_000111_380--Hb_001140_370 Hb_000111_380--Hb_033594_120 Hb_005496_140 Hb_005496_140 Hb_002863_050--Hb_005496_140 Hb_000580_180 Hb_000580_180 Hb_002863_050--Hb_000580_180 Hb_005144_160 Hb_005144_160 Hb_002863_050--Hb_005144_160 Hb_001142_030 Hb_001142_030 Hb_002863_050--Hb_001142_030 Hb_003416_010 Hb_003416_010 Hb_002863_050--Hb_003416_010 Hb_000416_040 Hb_000416_040 Hb_002863_050--Hb_000416_040 Hb_003633_030 Hb_003633_030 Hb_033594_120--Hb_003633_030 Hb_001252_130 Hb_001252_130 Hb_033594_120--Hb_001252_130 Hb_000421_220 Hb_000421_220 Hb_033594_120--Hb_000421_220 Hb_000054_090 Hb_000054_090 Hb_033594_120--Hb_000054_090 Hb_002473_130 Hb_002473_130 Hb_033594_120--Hb_002473_130 Hb_007691_030 Hb_007691_030 Hb_003428_030--Hb_007691_030 Hb_003525_010 Hb_003525_010 Hb_003428_030--Hb_003525_010 Hb_003428_030--Hb_000093_160 Hb_000038_170 Hb_000038_170 Hb_003428_030--Hb_000038_170 Hb_003125_120 Hb_003125_120 Hb_003428_030--Hb_003125_120 Hb_000032_270 Hb_000032_270 Hb_003428_030--Hb_000032_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
43.9439 30.7335 45.3186 62.4433 65.2768 66.6583
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
63.9036 98.3841 45.683 29.5097 37.7268

CAGE analysis