Hb_005736_010

Information

Type -
Description -
Location Contig5736: 5140-7273
Sequence    

Annotation

kegg
ID rcu:RCOM_0138900
description hypothetical protein
nr
ID XP_012066096.1
description PREDICTED: bidirectional sugar transporter SWEET1 isoform X2 [Jatropha curcas]
swissprot
ID Q8L9J7
description Bidirectional sugar transporter SWEET1 OS=Arabidopsis thaliana GN=SWEET1 PE=1 SV=1
trembl
ID A0A067L3Q6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25248 PE=4 SV=1
Gene Ontology
ID GO:0005783
description bidirectional sugar transporter sweet1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005736_010 0.0 - - PREDICTED: bidirectional sugar transporter SWEET1 isoform X2 [Jatropha curcas]
2 Hb_010926_020 0.0774829012 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Camelina sativa]
3 Hb_072670_010 0.0845120955 - - Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis]
4 Hb_057018_010 0.1016365888 - - hypothetical protein JCGZ_04004 [Jatropha curcas]
5 Hb_002511_050 0.1201406769 - - ATP binding protein, putative [Ricinus communis]
6 Hb_107495_060 0.1245162553 - - Cell division protein kinase, putative [Ricinus communis]
7 Hb_033772_040 0.1347222356 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001529_010 0.1466125425 - - -
9 Hb_002894_020 0.1467809998 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
10 Hb_008385_010 0.1483571656 - - sulfate transporter, putative [Ricinus communis]
11 Hb_000149_020 0.15367315 - - Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
12 Hb_087314_010 0.1556991093 - - -
13 Hb_000224_020 0.1560096103 - - PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]
14 Hb_148914_020 0.1575837641 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
15 Hb_000445_480 0.1575880083 - - cytochrome P450, putative [Ricinus communis]
16 Hb_002894_070 0.1585655171 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein B [Jatropha curcas]
17 Hb_004474_020 0.1606013957 - - aldo-keto reductase, putative [Ricinus communis]
18 Hb_034310_020 0.165953512 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 [Jatropha curcas]
19 Hb_001255_030 0.1663599478 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
20 Hb_001248_180 0.1680714567 - - -

Gene co-expression network

sample Hb_005736_010 Hb_005736_010 Hb_010926_020 Hb_010926_020 Hb_005736_010--Hb_010926_020 Hb_072670_010 Hb_072670_010 Hb_005736_010--Hb_072670_010 Hb_057018_010 Hb_057018_010 Hb_005736_010--Hb_057018_010 Hb_002511_050 Hb_002511_050 Hb_005736_010--Hb_002511_050 Hb_107495_060 Hb_107495_060 Hb_005736_010--Hb_107495_060 Hb_033772_040 Hb_033772_040 Hb_005736_010--Hb_033772_040 Hb_010926_020--Hb_057018_010 Hb_010926_020--Hb_072670_010 Hb_010926_020--Hb_002511_050 Hb_002894_020 Hb_002894_020 Hb_010926_020--Hb_002894_020 Hb_000224_020 Hb_000224_020 Hb_010926_020--Hb_000224_020 Hb_072670_010--Hb_057018_010 Hb_072670_010--Hb_107495_060 Hb_087314_010 Hb_087314_010 Hb_072670_010--Hb_087314_010 Hb_148914_020 Hb_148914_020 Hb_072670_010--Hb_148914_020 Hb_004652_040 Hb_004652_040 Hb_057018_010--Hb_004652_040 Hb_002014_120 Hb_002014_120 Hb_057018_010--Hb_002014_120 Hb_003337_010 Hb_003337_010 Hb_057018_010--Hb_003337_010 Hb_008385_010 Hb_008385_010 Hb_002511_050--Hb_008385_010 Hb_001529_010 Hb_001529_010 Hb_002511_050--Hb_001529_010 Hb_003582_010 Hb_003582_010 Hb_002511_050--Hb_003582_010 Hb_000445_480 Hb_000445_480 Hb_002511_050--Hb_000445_480 Hb_107495_060--Hb_087314_010 Hb_000373_260 Hb_000373_260 Hb_107495_060--Hb_000373_260 Hb_180695_010 Hb_180695_010 Hb_107495_060--Hb_180695_010 Hb_107495_060--Hb_033772_040 Hb_034310_020 Hb_034310_020 Hb_033772_040--Hb_034310_020 Hb_004319_100 Hb_004319_100 Hb_033772_040--Hb_004319_100 Hb_004474_020 Hb_004474_020 Hb_033772_040--Hb_004474_020 Hb_033772_040--Hb_001529_010 Hb_033772_040--Hb_010926_020 Hb_004899_380 Hb_004899_380 Hb_033772_040--Hb_004899_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.16417 0.726092 5.2226 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0740598 0.437198 0

CAGE analysis