Hb_005743_090

Information

Type -
Description -
Location Contig5743: 102855-103458
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005743_090 0.0 - - -
2 Hb_000866_360 0.1417647227 - - -
3 Hb_167364_020 0.2180616237 - - -
4 Hb_000189_060 0.2708600106 - - PREDICTED: uncharacterized protein LOC105637477 [Jatropha curcas]
5 Hb_109358_010 0.2721205738 - - -
6 Hb_000111_410 0.2830812823 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000513_080 0.2912752466 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 43 [Jatropha curcas]
8 Hb_004522_020 0.3015812322 - - PREDICTED: uncharacterized protein LOC105646836 [Jatropha curcas]
9 Hb_071379_010 0.3407900958 - - PREDICTED: mitogen-activated protein kinase kinase kinase 3-like [Nelumbo nucifera]
10 Hb_023226_050 0.341262362 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
11 Hb_003897_020 0.3524140978 transcription factor TF Family: Orphans transcription factor, putative [Ricinus communis]
12 Hb_000661_210 0.3587318179 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001329_170 0.3636076262 - - Chlorophyll a-b binding protein, chloroplastic [Aegilops tauschii]
14 Hb_000680_040 0.365930671 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
15 Hb_000003_140 0.3661854407 - - hypothetical protein glysoja_047034, partial [Glycine soja]
16 Hb_004241_220 0.3714012507 - - -
17 Hb_005725_200 0.3750354683 transcription factor TF Family: GRF hypothetical protein JCGZ_15989 [Jatropha curcas]
18 Hb_001049_080 0.3759976181 - - -
19 Hb_007632_150 0.3795853608 - - conserved hypothetical protein [Ricinus communis]
20 Hb_094730_010 0.3797415399 - - hypothetical protein JCGZ_04374 [Jatropha curcas]

Gene co-expression network

sample Hb_005743_090 Hb_005743_090 Hb_000866_360 Hb_000866_360 Hb_005743_090--Hb_000866_360 Hb_167364_020 Hb_167364_020 Hb_005743_090--Hb_167364_020 Hb_000189_060 Hb_000189_060 Hb_005743_090--Hb_000189_060 Hb_109358_010 Hb_109358_010 Hb_005743_090--Hb_109358_010 Hb_000111_410 Hb_000111_410 Hb_005743_090--Hb_000111_410 Hb_000513_080 Hb_000513_080 Hb_005743_090--Hb_000513_080 Hb_000866_360--Hb_109358_010 Hb_000866_360--Hb_000111_410 Hb_000866_360--Hb_167364_020 Hb_000866_360--Hb_000189_060 Hb_023226_050 Hb_023226_050 Hb_000866_360--Hb_023226_050 Hb_167364_020--Hb_000513_080 Hb_004522_020 Hb_004522_020 Hb_167364_020--Hb_004522_020 Hb_167364_020--Hb_000189_060 Hb_000516_070 Hb_000516_070 Hb_167364_020--Hb_000516_070 Hb_000189_060--Hb_000513_080 Hb_004640_040 Hb_004640_040 Hb_000189_060--Hb_004640_040 Hb_134312_010 Hb_134312_010 Hb_000189_060--Hb_134312_010 Hb_087008_010 Hb_087008_010 Hb_000189_060--Hb_087008_010 Hb_071379_010 Hb_071379_010 Hb_000189_060--Hb_071379_010 Hb_000680_040 Hb_000680_040 Hb_109358_010--Hb_000680_040 Hb_004241_220 Hb_004241_220 Hb_109358_010--Hb_004241_220 Hb_094730_010 Hb_094730_010 Hb_109358_010--Hb_094730_010 Hb_001433_060 Hb_001433_060 Hb_109358_010--Hb_001433_060 Hb_001184_120 Hb_001184_120 Hb_109358_010--Hb_001184_120 Hb_044662_050 Hb_044662_050 Hb_000111_410--Hb_044662_050 Hb_002641_040 Hb_002641_040 Hb_000111_410--Hb_002641_040 Hb_000653_020 Hb_000653_020 Hb_000111_410--Hb_000653_020 Hb_036790_030 Hb_036790_030 Hb_000111_410--Hb_036790_030 Hb_000513_080--Hb_087008_010 Hb_000513_080--Hb_004640_040 Hb_000513_080--Hb_134312_010 Hb_000513_080--Hb_071379_010 Hb_000123_100 Hb_000123_100 Hb_000513_080--Hb_000123_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.35674 0 20.3122 0 5.85566 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 2.85161 0 0 0

CAGE analysis