Hb_005747_020

Information

Type -
Description -
Location Contig5747: 8997-11158
Sequence    

Annotation

kegg
ID rcu:RCOM_1622030
description Cationic peroxidase 2 precursor, putative (EC:1.11.1.7)
nr
ID AEN70989.1
description bacterial-induced peroxidase [Gossypium schwendimanii]
swissprot
ID P22196
description Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1
trembl
ID I1T4H7
description Peroxidase OS=Gossypium schwendimanii PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005747_020 0.0 - - bacterial-induced peroxidase [Gossypium schwendimanii]
2 Hb_000563_070 0.0269499627 - - PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Sesamum indicum]
3 Hb_000264_250 0.0281879779 - - thioredoxin family protein [Arabidopsis thaliana]
4 Hb_002551_010 0.0331307917 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_106528_010 0.0395728267 - - Cationic peroxidase 2 precursor, putative [Ricinus communis]
6 Hb_094462_010 0.0397583215 - - hypothetical protein CISIN_1g033698mg [Citrus sinensis]
7 Hb_005747_040 0.0406943799 - - PREDICTED: peroxidase N1-like, partial [Nicotiana sylvestris]
8 Hb_001032_060 0.0465079126 - - PREDICTED: ankyrin-2-like [Citrus sinensis]
9 Hb_000419_080 0.052854446 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
10 Hb_001114_290 0.0562903336 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001114_220 0.0593869236 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
12 Hb_122025_010 0.0677541241 - - hypothetical protein POPTR_0003s052201g, partial [Populus trichocarpa]
13 Hb_001410_090 0.0680307562 - - transferase, putative [Ricinus communis]
14 Hb_000022_270 0.0680658941 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003685_060 0.0703970267 - - PREDICTED: laccase-15 [Jatropha curcas]
16 Hb_000488_040 0.0708433378 - - unnamed protein product [Vitis vinifera]
17 Hb_173102_010 0.0729121443 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
18 Hb_001604_140 0.0729993696 - - PREDICTED: ABC transporter G family member 10-like [Populus euphratica]
19 Hb_000201_080 0.0773370472 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
20 Hb_004592_020 0.0811681062 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_005747_020 Hb_005747_020 Hb_000563_070 Hb_000563_070 Hb_005747_020--Hb_000563_070 Hb_000264_250 Hb_000264_250 Hb_005747_020--Hb_000264_250 Hb_002551_010 Hb_002551_010 Hb_005747_020--Hb_002551_010 Hb_106528_010 Hb_106528_010 Hb_005747_020--Hb_106528_010 Hb_094462_010 Hb_094462_010 Hb_005747_020--Hb_094462_010 Hb_005747_040 Hb_005747_040 Hb_005747_020--Hb_005747_040 Hb_000563_070--Hb_000264_250 Hb_000563_070--Hb_002551_010 Hb_000563_070--Hb_094462_010 Hb_000563_070--Hb_106528_010 Hb_000563_070--Hb_005747_040 Hb_000264_250--Hb_002551_010 Hb_000264_250--Hb_106528_010 Hb_000264_250--Hb_005747_040 Hb_000264_250--Hb_094462_010 Hb_002551_010--Hb_106528_010 Hb_002551_010--Hb_005747_040 Hb_001114_290 Hb_001114_290 Hb_002551_010--Hb_001114_290 Hb_106528_010--Hb_005747_040 Hb_106528_010--Hb_001114_290 Hb_173102_010 Hb_173102_010 Hb_106528_010--Hb_173102_010 Hb_000022_270 Hb_000022_270 Hb_094462_010--Hb_000022_270 Hb_003685_060 Hb_003685_060 Hb_094462_010--Hb_003685_060 Hb_000419_080 Hb_000419_080 Hb_094462_010--Hb_000419_080 Hb_001604_140 Hb_001604_140 Hb_094462_010--Hb_001604_140 Hb_005747_040--Hb_001114_290 Hb_005747_040--Hb_173102_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.35313 0.0199608 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 12.4553 0

CAGE analysis