Hb_005779_070

Information

Type -
Description -
Location Contig5779: 43895-45382
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005779_070 0.0 - - -
2 Hb_005952_020 0.0044769422 - - -
3 Hb_010589_100 0.0301283152 - - Thioredoxin domain-containing protein 9-like protein [Morus notabilis]
4 Hb_008221_120 0.105713498 - - PREDICTED: GDSL esterase/lipase At5g63170-like [Jatropha curcas]
5 Hb_005305_190 0.1142593383 transcription factor TF Family: NAC -
6 Hb_007140_010 0.2066996689 - - -
7 Hb_172179_010 0.2072739625 - - PREDICTED: Werner Syndrome-like exonuclease [Jatropha curcas]
8 Hb_114146_010 0.3071427779 - - hypothetical protein JCGZ_15608 [Jatropha curcas]
9 Hb_000445_240 0.3088840503 - - conserved hypothetical protein [Ricinus communis]
10 Hb_106496_010 0.3108847315 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
11 Hb_115326_010 0.3327951215 - - -
12 Hb_000976_370 0.3347241817 - - beta-glucosidase, putative [Ricinus communis]
13 Hb_120112_010 0.3363095187 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
14 Hb_008689_020 0.3376289185 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001934_020 0.3416197555 - - PREDICTED: uncharacterized protein LOC105178413 [Sesamum indicum]
16 Hb_006535_010 0.3621255777 - - -
17 Hb_001519_070 0.3721670574 - - hypothetical protein JCGZ_09841 [Jatropha curcas]
18 Hb_000696_020 0.377968511 - - hypothetical protein JCGZ_25344 [Jatropha curcas]
19 Hb_167364_020 0.3919591928 - - -
20 Hb_000861_010 0.3990318945 - - -

Gene co-expression network

sample Hb_005779_070 Hb_005779_070 Hb_005952_020 Hb_005952_020 Hb_005779_070--Hb_005952_020 Hb_010589_100 Hb_010589_100 Hb_005779_070--Hb_010589_100 Hb_008221_120 Hb_008221_120 Hb_005779_070--Hb_008221_120 Hb_005305_190 Hb_005305_190 Hb_005779_070--Hb_005305_190 Hb_007140_010 Hb_007140_010 Hb_005779_070--Hb_007140_010 Hb_172179_010 Hb_172179_010 Hb_005779_070--Hb_172179_010 Hb_005952_020--Hb_010589_100 Hb_005952_020--Hb_008221_120 Hb_005952_020--Hb_005305_190 Hb_005952_020--Hb_007140_010 Hb_005952_020--Hb_172179_010 Hb_010589_100--Hb_008221_120 Hb_010589_100--Hb_005305_190 Hb_010589_100--Hb_007140_010 Hb_010589_100--Hb_172179_010 Hb_008221_120--Hb_005305_190 Hb_000976_370 Hb_000976_370 Hb_008221_120--Hb_000976_370 Hb_120112_010 Hb_120112_010 Hb_008221_120--Hb_120112_010 Hb_000445_240 Hb_000445_240 Hb_005305_190--Hb_000445_240 Hb_005305_190--Hb_007140_010 Hb_007140_010--Hb_172179_010 Hb_114146_010 Hb_114146_010 Hb_007140_010--Hb_114146_010 Hb_172179_010--Hb_114146_010 Hb_172179_010--Hb_005305_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.11286 0 0.0463334 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.103738 0 0 0

CAGE analysis