Hb_005843_070

Information

Type transcription factor
Description TF Family: ERF
Location Contig5843: 64698-65342
Sequence    

Annotation

kegg
ID fve:101295697
description ethylene-responsive transcription factor ERF109-like
nr
ID XP_012079573.1
description PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
swissprot
ID Q9SZ06
description Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=1 SV=1
trembl
ID A0A067KI25
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12386 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005843_070 0.0 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
2 Hb_005725_180 0.0239535241 - - -
3 Hb_001514_110 0.0613656325 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005946_190 0.0617658789 - - hypothetical protein EUGRSUZ_C01051 [Eucalyptus grandis]
5 Hb_015978_040 0.0724866685 - - PREDICTED: uncharacterized protein LOC105642609 [Jatropha curcas]
6 Hb_111908_010 0.0733137879 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_012691_040 0.0778096669 - - PREDICTED: cytochrome P450 81E8-like [Fragaria vesca subsp. vesca]
8 Hb_004117_360 0.0800260012 - - hypothetical protein JCGZ_00367 [Jatropha curcas]
9 Hb_004157_080 0.0930294965 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT12 [Jatropha curcas]
10 Hb_110048_010 0.0965072837 - - PREDICTED: uncharacterized protein LOC104887199 [Beta vulgaris subsp. vulgaris]
11 Hb_001565_050 0.0966783466 - - PREDICTED: receptor-like protein kinase 5 [Eucalyptus grandis]
12 Hb_142691_010 0.0974331943 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
13 Hb_022768_010 0.1009645205 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Populus euphratica]
14 Hb_034132_010 0.1019586278 - - hypothetical protein B456_007G015400 [Gossypium raimondii]
15 Hb_073423_010 0.1035487455 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_032966_010 0.1053091459 - - receptor serine/threonine kinase, putative [Ricinus communis]
17 Hb_008579_010 0.1056917005 - - hypothetical protein JCGZ_01311 [Jatropha curcas]
18 Hb_002486_030 0.1072358819 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
19 Hb_156055_020 0.1098700106 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004899_160 0.1099155555 - - -

Gene co-expression network

sample Hb_005843_070 Hb_005843_070 Hb_005725_180 Hb_005725_180 Hb_005843_070--Hb_005725_180 Hb_001514_110 Hb_001514_110 Hb_005843_070--Hb_001514_110 Hb_005946_190 Hb_005946_190 Hb_005843_070--Hb_005946_190 Hb_015978_040 Hb_015978_040 Hb_005843_070--Hb_015978_040 Hb_111908_010 Hb_111908_010 Hb_005843_070--Hb_111908_010 Hb_012691_040 Hb_012691_040 Hb_005843_070--Hb_012691_040 Hb_005725_180--Hb_001514_110 Hb_005725_180--Hb_012691_040 Hb_004117_360 Hb_004117_360 Hb_005725_180--Hb_004117_360 Hb_005725_180--Hb_015978_040 Hb_005725_180--Hb_111908_010 Hb_001514_110--Hb_012691_040 Hb_001514_110--Hb_004117_360 Hb_073423_010 Hb_073423_010 Hb_001514_110--Hb_073423_010 Hb_142691_010 Hb_142691_010 Hb_001514_110--Hb_142691_010 Hb_002486_030 Hb_002486_030 Hb_001514_110--Hb_002486_030 Hb_005946_190--Hb_005725_180 Hb_004157_080 Hb_004157_080 Hb_005946_190--Hb_004157_080 Hb_005946_190--Hb_015978_040 Hb_005946_190--Hb_001514_110 Hb_022768_010 Hb_022768_010 Hb_005946_190--Hb_022768_010 Hb_034132_010 Hb_034132_010 Hb_015978_040--Hb_034132_010 Hb_015978_040--Hb_022768_010 Hb_032966_010 Hb_032966_010 Hb_015978_040--Hb_032966_010 Hb_001565_050 Hb_001565_050 Hb_015978_040--Hb_001565_050 Hb_111908_010--Hb_004117_360 Hb_111908_010--Hb_001514_110 Hb_110048_010 Hb_110048_010 Hb_111908_010--Hb_110048_010 Hb_111908_010--Hb_012691_040 Hb_012691_040--Hb_142691_010 Hb_008579_010 Hb_008579_010 Hb_012691_040--Hb_008579_010 Hb_012691_040--Hb_073423_010 Hb_012691_040--Hb_002486_030 Hb_012691_040--Hb_004117_360
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.02548 0.613929 0.113663 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis