Hb_005843_130

Information

Type -
Description -
Location Contig5843: 100484-104057
Sequence    

Annotation

kegg
ID rcu:RCOM_1407690
description cytochrome P450, putative (EC:1.14.13.79)
nr
ID KDP31928.1
description hypothetical protein JCGZ_12389 [Jatropha curcas]
swissprot
ID Q9LJK2
description Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thaliana GN=CYP707A4 PE=2 SV=2
trembl
ID A0A067KA98
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12389 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49938: 102474-102780
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005843_130 0.0 - - hypothetical protein JCGZ_12389 [Jatropha curcas]
2 Hb_080332_010 0.1994472817 - - hypothetical protein POPTR_0018s10590g [Populus trichocarpa]
3 Hb_012180_010 0.2048297445 - - PREDICTED: (S)-ureidoglycine aminohydrolase [Jatropha curcas]
4 Hb_000497_200 0.2103289843 - - -
5 Hb_044653_030 0.2148862146 - - -
6 Hb_063716_090 0.2154913525 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000755_060 0.2164917052 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104424740 [Eucalyptus grandis]
8 Hb_005694_010 0.2168039141 transcription factor TF Family: C2C2-Dof F-box family protein, putative isoform 1 [Theobroma cacao]
9 Hb_003092_060 0.2193252475 - - calcineurin-like phosphoesterase [Manihot esculenta]
10 Hb_001004_120 0.222304037 - - PREDICTED: receptor-like protein kinase HERK 1 isoform X2 [Jatropha curcas]
11 Hb_000331_280 0.2295870403 - - AMP dependent CoA ligase, putative [Ricinus communis]
12 Hb_000098_050 0.231850654 - - BnaCnng11900D [Brassica napus]
13 Hb_006629_010 0.233455918 - - Glutathione S-transferase 2 isoform 3 [Theobroma cacao]
14 Hb_188063_050 0.2337749401 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
15 Hb_006856_010 0.2365880754 - - hypothetical protein CISIN_1g019592mg [Citrus sinensis]
16 Hb_000318_040 0.2368646011 - - hypothetical protein JCGZ_04877 [Jatropha curcas]
17 Hb_086639_080 0.2371842546 - - conserved hypothetical protein [Ricinus communis]
18 Hb_170674_010 0.2376823318 - - hypothetical protein JCGZ_23765 [Jatropha curcas]
19 Hb_027760_070 0.2383484154 - - PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02-like [Jatropha curcas]
20 Hb_141069_010 0.2385276847 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_005843_130 Hb_005843_130 Hb_080332_010 Hb_080332_010 Hb_005843_130--Hb_080332_010 Hb_012180_010 Hb_012180_010 Hb_005843_130--Hb_012180_010 Hb_000497_200 Hb_000497_200 Hb_005843_130--Hb_000497_200 Hb_044653_030 Hb_044653_030 Hb_005843_130--Hb_044653_030 Hb_063716_090 Hb_063716_090 Hb_005843_130--Hb_063716_090 Hb_000755_060 Hb_000755_060 Hb_005843_130--Hb_000755_060 Hb_010315_100 Hb_010315_100 Hb_080332_010--Hb_010315_100 Hb_003430_080 Hb_003430_080 Hb_080332_010--Hb_003430_080 Hb_000926_340 Hb_000926_340 Hb_080332_010--Hb_000926_340 Hb_000318_040 Hb_000318_040 Hb_080332_010--Hb_000318_040 Hb_028487_130 Hb_028487_130 Hb_080332_010--Hb_028487_130 Hb_002250_050 Hb_002250_050 Hb_080332_010--Hb_002250_050 Hb_188063_050 Hb_188063_050 Hb_012180_010--Hb_188063_050 Hb_000098_050 Hb_000098_050 Hb_012180_010--Hb_000098_050 Hb_001085_080 Hb_001085_080 Hb_012180_010--Hb_001085_080 Hb_007137_050 Hb_007137_050 Hb_012180_010--Hb_007137_050 Hb_005970_010 Hb_005970_010 Hb_012180_010--Hb_005970_010 Hb_000622_110 Hb_000622_110 Hb_012180_010--Hb_000622_110 Hb_000497_200--Hb_080332_010 Hb_000248_100 Hb_000248_100 Hb_000497_200--Hb_000248_100 Hb_000098_200 Hb_000098_200 Hb_000497_200--Hb_000098_200 Hb_001085_070 Hb_001085_070 Hb_000497_200--Hb_001085_070 Hb_000497_200--Hb_000755_060 Hb_000022_050 Hb_000022_050 Hb_044653_030--Hb_000022_050 Hb_000261_230 Hb_000261_230 Hb_044653_030--Hb_000261_230 Hb_000034_080 Hb_000034_080 Hb_044653_030--Hb_000034_080 Hb_000120_170 Hb_000120_170 Hb_044653_030--Hb_000120_170 Hb_004586_300 Hb_004586_300 Hb_044653_030--Hb_004586_300 Hb_000096_120 Hb_000096_120 Hb_044653_030--Hb_000096_120 Hb_017948_030 Hb_017948_030 Hb_063716_090--Hb_017948_030 Hb_003599_030 Hb_003599_030 Hb_063716_090--Hb_003599_030 Hb_001675_320 Hb_001675_320 Hb_063716_090--Hb_001675_320 Hb_005539_310 Hb_005539_310 Hb_063716_090--Hb_005539_310 Hb_000203_270 Hb_000203_270 Hb_063716_090--Hb_000203_270 Hb_004987_020 Hb_004987_020 Hb_063716_090--Hb_004987_020 Hb_000755_060--Hb_000098_200 Hb_001227_100 Hb_001227_100 Hb_000755_060--Hb_001227_100 Hb_000029_440 Hb_000029_440 Hb_000755_060--Hb_000029_440 Hb_001080_130 Hb_001080_130 Hb_000755_060--Hb_001080_130 Hb_000755_060--Hb_012180_010 Hb_000720_080 Hb_000720_080 Hb_000755_060--Hb_000720_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0287969 0.181602 0.12266 0.317366 0.205108 0.121304
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.164079 0.0258164 0 0.144356 0.0539098

CAGE analysis