Hb_005867_060

Information

Type -
Description -
Location Contig5867: 40003-45878
Sequence    

Annotation

kegg
ID rcu:RCOM_1039620
description cytochrome P450, putative (EC:1.6.2.4)
nr
ID XP_012068023.1
description PREDICTED: NADPH--cytochrome P450 reductase [Jatropha curcas]
swissprot
ID P37116
description NADPH--cytochrome P450 reductase OS=Vigna radiata var. radiata PE=1 SV=1
trembl
ID A0A067KZ79
description NADPH--cytochrome P450 reductase OS=Jatropha curcas GN=JCGZ_15894 PE=3 SV=1
Gene Ontology
ID GO:0005506
description nadph--cytochrome p450 reductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_49999: 39900-45855
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005867_060 0.0 - - PREDICTED: NADPH--cytochrome P450 reductase [Jatropha curcas]
2 Hb_007336_020 0.1021287489 - - Mannose-P-dolichol utilization defect 1 protein, putative [Ricinus communis]
3 Hb_134364_010 0.1075736797 - - PREDICTED: transcriptional adapter ADA2b isoform X1 [Jatropha curcas]
4 Hb_006824_060 0.1112901206 - - PREDICTED: uncharacterized protein LOC105650737 [Jatropha curcas]
5 Hb_002681_050 0.1134455705 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
6 Hb_008253_010 0.1135167769 - - PREDICTED: uncharacterized protein LOC105633240 [Jatropha curcas]
7 Hb_007590_080 0.1138927686 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Malus domestica]
8 Hb_001369_180 0.1139087527 - - PREDICTED: protein RFT1 homolog isoform X1 [Jatropha curcas]
9 Hb_000982_160 0.1156710016 - - PREDICTED: CLIP-associated protein [Jatropha curcas]
10 Hb_001124_120 0.1189114257 - - PREDICTED: uncharacterized protein LOC105631831 isoform X1 [Jatropha curcas]
11 Hb_005829_010 0.119574561 - - PREDICTED: uncharacterized protein LOC105640979 [Jatropha curcas]
12 Hb_007477_080 0.1196060049 - - conserved hypothetical protein [Ricinus communis]
13 Hb_150360_030 0.1196774686 - - PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like [Jatropha curcas]
14 Hb_001124_160 0.121248098 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]
15 Hb_002529_060 0.1224876412 - - PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282107 [Jatropha curcas]
16 Hb_000322_090 0.122556324 - - diacylglycerol O-acyltransferase 1 [Jatropha curcas]
17 Hb_000094_300 0.122819556 - - hypothetical protein POPTR_0002s26360g [Populus trichocarpa]
18 Hb_073171_040 0.123433165 - - malic enzyme, putative [Ricinus communis]
19 Hb_001863_260 0.1234583524 - - ubiquitin-protein ligase, putative [Ricinus communis]
20 Hb_000179_170 0.1234845347 - - PREDICTED: protein bem46 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_005867_060 Hb_005867_060 Hb_007336_020 Hb_007336_020 Hb_005867_060--Hb_007336_020 Hb_134364_010 Hb_134364_010 Hb_005867_060--Hb_134364_010 Hb_006824_060 Hb_006824_060 Hb_005867_060--Hb_006824_060 Hb_002681_050 Hb_002681_050 Hb_005867_060--Hb_002681_050 Hb_008253_010 Hb_008253_010 Hb_005867_060--Hb_008253_010 Hb_007590_080 Hb_007590_080 Hb_005867_060--Hb_007590_080 Hb_007336_020--Hb_007590_080 Hb_002475_160 Hb_002475_160 Hb_007336_020--Hb_002475_160 Hb_000322_100 Hb_000322_100 Hb_007336_020--Hb_000322_100 Hb_011942_080 Hb_011942_080 Hb_007336_020--Hb_011942_080 Hb_001369_180 Hb_001369_180 Hb_007336_020--Hb_001369_180 Hb_007336_020--Hb_008253_010 Hb_134364_010--Hb_008253_010 Hb_001863_260 Hb_001863_260 Hb_134364_010--Hb_001863_260 Hb_000364_080 Hb_000364_080 Hb_134364_010--Hb_000364_080 Hb_009265_080 Hb_009265_080 Hb_134364_010--Hb_009265_080 Hb_010423_020 Hb_010423_020 Hb_134364_010--Hb_010423_020 Hb_002942_160 Hb_002942_160 Hb_134364_010--Hb_002942_160 Hb_000368_020 Hb_000368_020 Hb_006824_060--Hb_000368_020 Hb_000189_330 Hb_000189_330 Hb_006824_060--Hb_000189_330 Hb_007904_120 Hb_007904_120 Hb_006824_060--Hb_007904_120 Hb_006824_060--Hb_001863_260 Hb_001377_320 Hb_001377_320 Hb_006824_060--Hb_001377_320 Hb_006824_060--Hb_008253_010 Hb_000606_090 Hb_000606_090 Hb_002681_050--Hb_000606_090 Hb_007477_080 Hb_007477_080 Hb_002681_050--Hb_007477_080 Hb_002681_050--Hb_001377_320 Hb_073171_040 Hb_073171_040 Hb_002681_050--Hb_073171_040 Hb_008511_130 Hb_008511_130 Hb_002681_050--Hb_008511_130 Hb_002529_060 Hb_002529_060 Hb_002681_050--Hb_002529_060 Hb_008253_010--Hb_009265_080 Hb_002007_350 Hb_002007_350 Hb_008253_010--Hb_002007_350 Hb_004678_060 Hb_004678_060 Hb_008253_010--Hb_004678_060 Hb_008253_010--Hb_007590_080 Hb_007590_080--Hb_002007_350 Hb_007894_140 Hb_007894_140 Hb_007590_080--Hb_007894_140 Hb_000100_070 Hb_000100_070 Hb_007590_080--Hb_000100_070 Hb_000803_300 Hb_000803_300 Hb_007590_080--Hb_000803_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
65.3867 21.9997 27.7302 32.39 52.3303 51.915
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
71.2835 17.8177 27.3765 14.2823 27.7754

CAGE analysis