Hb_005880_010

Information

Type -
Description -
Location Contig5880: 11885-17616
Sequence    

Annotation

kegg
ID pop:POPTR_0009s14490g
description hypothetical protein
nr
ID XP_012087676.1
description PREDICTED: uncharacterized protein LOC105646431 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JL94
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25332 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005880_010 0.0 - - PREDICTED: uncharacterized protein LOC105646431 [Jatropha curcas]
2 Hb_008175_030 0.1112871976 transcription factor TF Family: TAZ PREDICTED: BTB/POZ and TAZ domain-containing protein 3 [Jatropha curcas]
3 Hb_002833_020 0.1120697864 desease resistance Gene Name: LRR_4 PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
4 Hb_002660_040 0.1183772258 - - PREDICTED: CASP-like protein 5A1 isoform X1 [Jatropha curcas]
5 Hb_000778_020 0.1199352319 - - PREDICTED: salicylic acid-binding protein 2-like [Jatropha curcas]
6 Hb_000261_320 0.1252880932 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
7 Hb_001369_160 0.1271286047 - - PREDICTED: uncharacterized protein LOC105648628 [Jatropha curcas]
8 Hb_000417_280 0.1332376728 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000197_230 0.1340258081 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
10 Hb_002739_060 0.1361706122 - - -
11 Hb_001410_010 0.1370244723 transcription factor TF Family: RWP-RK PREDICTED: protein NLP7-like [Jatropha curcas]
12 Hb_001488_280 0.1403029473 - - hypothetical protein JCGZ_19947 [Jatropha curcas]
13 Hb_115513_040 0.142135631 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000345_340 0.1435528058 - - PREDICTED: DNA polymerase zeta catalytic subunit [Jatropha curcas]
15 Hb_001091_020 0.1446615551 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
16 Hb_159411_010 0.1447463115 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
17 Hb_002218_070 0.1455374732 - - PREDICTED: myosin-binding protein 1 [Jatropha curcas]
18 Hb_000236_110 0.1462476434 - - PREDICTED: chaperone protein dnaJ 20, chloroplastic [Jatropha curcas]
19 Hb_002003_040 0.1470307345 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Jatropha curcas]
20 Hb_000589_220 0.1477512522 desease resistance Gene Name: NB-ARC PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]

Gene co-expression network

sample Hb_005880_010 Hb_005880_010 Hb_008175_030 Hb_008175_030 Hb_005880_010--Hb_008175_030 Hb_002833_020 Hb_002833_020 Hb_005880_010--Hb_002833_020 Hb_002660_040 Hb_002660_040 Hb_005880_010--Hb_002660_040 Hb_000778_020 Hb_000778_020 Hb_005880_010--Hb_000778_020 Hb_000261_320 Hb_000261_320 Hb_005880_010--Hb_000261_320 Hb_001369_160 Hb_001369_160 Hb_005880_010--Hb_001369_160 Hb_008175_030--Hb_000778_020 Hb_002739_060 Hb_002739_060 Hb_008175_030--Hb_002739_060 Hb_001408_150 Hb_001408_150 Hb_008175_030--Hb_001408_150 Hb_057079_020 Hb_057079_020 Hb_008175_030--Hb_057079_020 Hb_000532_130 Hb_000532_130 Hb_008175_030--Hb_000532_130 Hb_001008_110 Hb_001008_110 Hb_002833_020--Hb_001008_110 Hb_000417_280 Hb_000417_280 Hb_002833_020--Hb_000417_280 Hb_000100_210 Hb_000100_210 Hb_002833_020--Hb_000100_210 Hb_000085_380 Hb_000085_380 Hb_002833_020--Hb_000085_380 Hb_000120_310 Hb_000120_310 Hb_002833_020--Hb_000120_310 Hb_042202_020 Hb_042202_020 Hb_002833_020--Hb_042202_020 Hb_000527_140 Hb_000527_140 Hb_002660_040--Hb_000527_140 Hb_064985_010 Hb_064985_010 Hb_002660_040--Hb_064985_010 Hb_002660_040--Hb_002833_020 Hb_002660_040--Hb_001008_110 Hb_006241_010 Hb_006241_010 Hb_002660_040--Hb_006241_010 Hb_000778_020--Hb_057079_020 Hb_002928_180 Hb_002928_180 Hb_000778_020--Hb_002928_180 Hb_010253_020 Hb_010253_020 Hb_000778_020--Hb_010253_020 Hb_000778_020--Hb_001408_150 Hb_000189_120 Hb_000189_120 Hb_000778_020--Hb_000189_120 Hb_002003_040 Hb_002003_040 Hb_000261_320--Hb_002003_040 Hb_000261_320--Hb_002833_020 Hb_001391_100 Hb_001391_100 Hb_000261_320--Hb_001391_100 Hb_073973_020 Hb_073973_020 Hb_000261_320--Hb_073973_020 Hb_001268_300 Hb_001268_300 Hb_000261_320--Hb_001268_300 Hb_001369_160--Hb_000120_310 Hb_001856_170 Hb_001856_170 Hb_001369_160--Hb_001856_170 Hb_002662_090 Hb_002662_090 Hb_001369_160--Hb_002662_090 Hb_001596_020 Hb_001596_020 Hb_001369_160--Hb_001596_020 Hb_002447_150 Hb_002447_150 Hb_001369_160--Hb_002447_150 Hb_003894_100 Hb_003894_100 Hb_001369_160--Hb_003894_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.31312 18.179 5.89464 7.91768 1.73901 1.78646
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.778932 0.486493 0.167903 17.6411 8.34584

CAGE analysis