Hb_005883_060

Information

Type -
Description -
Location Contig5883: 63383-69104
Sequence    

Annotation

kegg
ID cic:CICLE_v10020622mg
description hypothetical protein
nr
ID XP_012080164.1
description PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1 [Jatropha curcas]
swissprot
ID Q8VYP6
description Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Arabidopsis thaliana GN=At5g11010 PE=2 SV=1
trembl
ID A0A067KH75
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11550 PE=4 SV=1
Gene Ontology
ID GO:0005634
description polynucleotide 5 -hydroxyl-kinase nol9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50040: 63911-64726 , PASA_asmbl_50041: 65315-69003
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005883_060 0.0 - - PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9 isoform X1 [Jatropha curcas]
2 Hb_001512_030 0.0834593907 - - PREDICTED: surfeit locus protein 2 [Jatropha curcas]
3 Hb_000120_460 0.0839809557 - - PREDICTED: thioredoxin reductase NTRB-like [Jatropha curcas]
4 Hb_025240_040 0.0844747273 - - hypothetical protein JCGZ_02438 [Jatropha curcas]
5 Hb_000985_030 0.085693036 - - PREDICTED: RRP15-like protein [Populus euphratica]
6 Hb_058999_020 0.086422969 - - PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Jatropha curcas]
7 Hb_002182_080 0.0865509694 - - 3-5 exonuclease, putative [Ricinus communis]
8 Hb_001726_020 0.0867655161 - - PREDICTED: endophilin-A1 [Jatropha curcas]
9 Hb_003401_050 0.0871757107 - - PREDICTED: origin of replication complex subunit 2 [Jatropha curcas]
10 Hb_000976_170 0.0886896746 - - PREDICTED: ATPase family AAA domain-containing protein 3-like [Jatropha curcas]
11 Hb_004143_060 0.0892624235 - - DNA binding protein, putative [Ricinus communis]
12 Hb_000331_260 0.0897637172 - - PREDICTED: WD repeat-containing protein 74 isoform X2 [Jatropha curcas]
13 Hb_003053_020 0.0901520523 - - PREDICTED: STE20/SPS1-related proline-alanine-rich protein kinase [Jatropha curcas]
14 Hb_000086_400 0.0904461681 - - calmodulin binding protein, putative [Ricinus communis]
15 Hb_000066_080 0.0910151566 - - PREDICTED: mRNA cap guanine-N7 methyltransferase 2 isoform X2 [Jatropha curcas]
16 Hb_000783_020 0.0917845306 - - PREDICTED: glycerol-3-phosphate dehydrogenase SDP6, mitochondrial [Jatropha curcas]
17 Hb_002046_180 0.0925091859 - - PREDICTED: uncharacterized protein LOC105641295 [Jatropha curcas]
18 Hb_005269_070 0.0933696155 - - PREDICTED: translation factor GUF1 homolog, organellar chromatophore [Jatropha curcas]
19 Hb_000215_110 0.0940683917 - - PREDICTED: uncharacterized protein C3F10.06c isoform X1 [Jatropha curcas]
20 Hb_000035_180 0.0960788376 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 4 [Jatropha curcas]

Gene co-expression network

sample Hb_005883_060 Hb_005883_060 Hb_001512_030 Hb_001512_030 Hb_005883_060--Hb_001512_030 Hb_000120_460 Hb_000120_460 Hb_005883_060--Hb_000120_460 Hb_025240_040 Hb_025240_040 Hb_005883_060--Hb_025240_040 Hb_000985_030 Hb_000985_030 Hb_005883_060--Hb_000985_030 Hb_058999_020 Hb_058999_020 Hb_005883_060--Hb_058999_020 Hb_002182_080 Hb_002182_080 Hb_005883_060--Hb_002182_080 Hb_000505_040 Hb_000505_040 Hb_001512_030--Hb_000505_040 Hb_001633_050 Hb_001633_050 Hb_001512_030--Hb_001633_050 Hb_007904_260 Hb_007904_260 Hb_001512_030--Hb_007904_260 Hb_001512_030--Hb_000985_030 Hb_003605_090 Hb_003605_090 Hb_001512_030--Hb_003605_090 Hb_004889_010 Hb_004889_010 Hb_001512_030--Hb_004889_010 Hb_000976_170 Hb_000976_170 Hb_000120_460--Hb_000976_170 Hb_000120_460--Hb_025240_040 Hb_004218_110 Hb_004218_110 Hb_000120_460--Hb_004218_110 Hb_003697_040 Hb_003697_040 Hb_000120_460--Hb_003697_040 Hb_108350_010 Hb_108350_010 Hb_000120_460--Hb_108350_010 Hb_001545_170 Hb_001545_170 Hb_000120_460--Hb_001545_170 Hb_025240_040--Hb_004218_110 Hb_004254_120 Hb_004254_120 Hb_025240_040--Hb_004254_120 Hb_015934_070 Hb_015934_070 Hb_025240_040--Hb_015934_070 Hb_127552_030 Hb_127552_030 Hb_025240_040--Hb_127552_030 Hb_002759_060 Hb_002759_060 Hb_025240_040--Hb_002759_060 Hb_000421_220 Hb_000421_220 Hb_025240_040--Hb_000421_220 Hb_001489_080 Hb_001489_080 Hb_000985_030--Hb_001489_080 Hb_002169_040 Hb_002169_040 Hb_000985_030--Hb_002169_040 Hb_000783_020 Hb_000783_020 Hb_000985_030--Hb_000783_020 Hb_000777_040 Hb_000777_040 Hb_000985_030--Hb_000777_040 Hb_005269_070 Hb_005269_070 Hb_000985_030--Hb_005269_070 Hb_004934_100 Hb_004934_100 Hb_000985_030--Hb_004934_100 Hb_000757_060 Hb_000757_060 Hb_058999_020--Hb_000757_060 Hb_005779_060 Hb_005779_060 Hb_058999_020--Hb_005779_060 Hb_000227_080 Hb_000227_080 Hb_058999_020--Hb_000227_080 Hb_000215_110 Hb_000215_110 Hb_058999_020--Hb_000215_110 Hb_000465_460 Hb_000465_460 Hb_058999_020--Hb_000465_460 Hb_002044_080 Hb_002044_080 Hb_058999_020--Hb_002044_080 Hb_001279_150 Hb_001279_150 Hb_002182_080--Hb_001279_150 Hb_002835_080 Hb_002835_080 Hb_002182_080--Hb_002835_080 Hb_002182_080--Hb_000215_110 Hb_019280_040 Hb_019280_040 Hb_002182_080--Hb_019280_040 Hb_008092_040 Hb_008092_040 Hb_002182_080--Hb_008092_040 Hb_003108_020 Hb_003108_020 Hb_002182_080--Hb_003108_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.76493 5.44574 7.77683 7.18143 5.73457 15.0813
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.376 14.5067 16.445 9.00968 8.89862

CAGE analysis