Hb_005901_030

Information

Type -
Description -
Location Contig5901: 48886-66227
Sequence    

Annotation

kegg
ID rcu:RCOM_0395650
description kinesin, putative
nr
ID XP_012066330.1
description PREDICTED: phragmoplast orienting kinesin 2 isoform X1 [Jatropha curcas]
swissprot
ID Q27IK7
description Phragmoplast orienting kinesin-1 OS=Arabidopsis thaliana GN=POK1 PE=1 SV=1
trembl
ID A0A067L6T3
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_23895 PE=3 SV=1
Gene Ontology
ID GO:0005871
description phragmoplast orienting kinesin 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005901_030 0.0 - - PREDICTED: phragmoplast orienting kinesin 2 isoform X1 [Jatropha curcas]
2 Hb_004957_020 0.1075855959 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004155_020 0.1226845698 transcription factor TF Family: MYB myb, putative [Ricinus communis]
4 Hb_000260_650 0.1286517852 - - PREDICTED: protein PFC0760c [Jatropha curcas]
5 Hb_000211_100 0.1310639347 - - PREDICTED: biotin synthase [Jatropha curcas]
6 Hb_021495_010 0.1412135042 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000640_050 0.1439622875 - - DNA replication licensing factor MCM7, putative [Ricinus communis]
8 Hb_001369_470 0.147618192 - - PREDICTED: monocopper oxidase-like protein SKS1 [Jatropha curcas]
9 Hb_000345_410 0.1477074887 - - PREDICTED: kinesin-like protein KIFC3 [Jatropha curcas]
10 Hb_000288_090 0.1495600243 - - unnamed protein product [Vitis vinifera]
11 Hb_143813_020 0.153539686 transcription factor TF Family: WRKY hypothetical protein POPTR_0006s10950g [Populus trichocarpa]
12 Hb_000959_190 0.1541585138 - - PREDICTED: crossover junction endonuclease EME1B-like [Jatropha curcas]
13 Hb_010812_070 0.1545772435 - - PREDICTED: LOW QUALITY PROTEIN: protein NETWORKED 4A [Jatropha curcas]
14 Hb_000181_270 0.1598181074 - - ATP binding protein, putative [Ricinus communis]
15 Hb_005903_020 0.1603590165 - - 12-oxophytodienoate reductase 2 [Theobroma cacao]
16 Hb_000009_610 0.1606391358 - - PREDICTED: uncharacterized protein LOC105639638 isoform X2 [Jatropha curcas]
17 Hb_011485_030 0.1612425007 - - PREDICTED: uncharacterized protein LOC105647814 [Jatropha curcas]
18 Hb_005144_210 0.1622769284 - - conserved hypothetical protein [Ricinus communis]
19 Hb_010998_050 0.1629485361 - - PREDICTED: kinesin-like protein KIF22 isoform X2 [Jatropha curcas]
20 Hb_001232_090 0.1636739032 - - PREDICTED: regulator of telomere elongation helicase 1 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_005901_030 Hb_005901_030 Hb_004957_020 Hb_004957_020 Hb_005901_030--Hb_004957_020 Hb_004155_020 Hb_004155_020 Hb_005901_030--Hb_004155_020 Hb_000260_650 Hb_000260_650 Hb_005901_030--Hb_000260_650 Hb_000211_100 Hb_000211_100 Hb_005901_030--Hb_000211_100 Hb_021495_010 Hb_021495_010 Hb_005901_030--Hb_021495_010 Hb_000640_050 Hb_000640_050 Hb_005901_030--Hb_000640_050 Hb_000959_190 Hb_000959_190 Hb_004957_020--Hb_000959_190 Hb_003430_040 Hb_003430_040 Hb_004957_020--Hb_003430_040 Hb_003874_010 Hb_003874_010 Hb_004957_020--Hb_003874_010 Hb_004957_020--Hb_000211_100 Hb_000345_290 Hb_000345_290 Hb_004957_020--Hb_000345_290 Hb_001232_090 Hb_001232_090 Hb_004155_020--Hb_001232_090 Hb_000526_010 Hb_000526_010 Hb_004155_020--Hb_000526_010 Hb_004155_020--Hb_000260_650 Hb_143813_020 Hb_143813_020 Hb_004155_020--Hb_143813_020 Hb_000563_440 Hb_000563_440 Hb_004155_020--Hb_000563_440 Hb_000960_090 Hb_000960_090 Hb_000260_650--Hb_000960_090 Hb_000288_090 Hb_000288_090 Hb_000260_650--Hb_000288_090 Hb_000668_060 Hb_000668_060 Hb_000260_650--Hb_000668_060 Hb_006970_130 Hb_006970_130 Hb_000260_650--Hb_006970_130 Hb_011386_050 Hb_011386_050 Hb_000211_100--Hb_011386_050 Hb_005784_070 Hb_005784_070 Hb_000211_100--Hb_005784_070 Hb_010080_010 Hb_010080_010 Hb_000211_100--Hb_010080_010 Hb_000098_150 Hb_000098_150 Hb_000211_100--Hb_000098_150 Hb_021495_010--Hb_000640_050 Hb_001195_640 Hb_001195_640 Hb_021495_010--Hb_001195_640 Hb_010812_070 Hb_010812_070 Hb_021495_010--Hb_010812_070 Hb_021495_010--Hb_000211_100 Hb_003050_260 Hb_003050_260 Hb_021495_010--Hb_003050_260 Hb_000640_050--Hb_000959_190 Hb_010998_050 Hb_010998_050 Hb_000640_050--Hb_010998_050 Hb_000640_050--Hb_004957_020 Hb_000640_050--Hb_003874_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.541027 0.403137 3.60688 1.24529 0.406484 0.309648
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.324135 0.263587 0.408272 0.92612 0.273326

CAGE analysis