Hb_005914_140

Information

Type -
Description -
Location Contig5914: 79453-80322
Sequence    

Annotation

kegg
ID pop:POPTR_0010s07740g
description POPTRDRAFT_768900; hypothetical protein
nr
ID XP_012069898.1
description PREDICTED: uncharacterized protein LOC105632183 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L8E0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02377 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50239: 73777-80484
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005914_140 0.0 - - PREDICTED: uncharacterized protein LOC105632183 [Jatropha curcas]
2 Hb_000928_190 0.0952152046 - - PREDICTED: putative acyl-activating enzyme 19 isoform X1 [Jatropha curcas]
3 Hb_006683_020 0.0975119056 - - PREDICTED: nucleosome assembly protein 1;4 [Jatropha curcas]
4 Hb_001318_050 0.1030774434 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
5 Hb_004094_020 0.1033485143 - - Pyruvate kinase family protein isoform 1 [Theobroma cacao]
6 Hb_132880_040 0.1050294336 - - PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 [Jatropha curcas]
7 Hb_019280_010 0.1067360087 - - PREDICTED: F-box protein At5g39450 isoform X2 [Jatropha curcas]
8 Hb_000800_090 0.1102171473 rubber biosynthesis Gene Name: Dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial [Jatropha curcas]
9 Hb_000237_050 0.113725878 - - CP2 [Hevea brasiliensis]
10 Hb_000625_090 0.117882425 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001157_200 0.118420944 - - PREDICTED: uncharacterized protein LOC105645131 [Jatropha curcas]
12 Hb_001642_070 0.1194727086 - - PREDICTED: uncharacterized protein LOC105646431 [Jatropha curcas]
13 Hb_103684_010 0.1197709438 - - PREDICTED: cullin-1 isoform X3 [Nicotiana tomentosiformis]
14 Hb_002025_030 0.1207228414 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
15 Hb_001006_270 0.1210527258 - - peptide transporter, putative [Ricinus communis]
16 Hb_000406_150 0.121904593 - - sodium/hydrogen exchanger, putative [Ricinus communis]
17 Hb_004450_070 0.122596628 - - PREDICTED: 2-hydroxyacyl-CoA lyase [Jatropha curcas]
18 Hb_000012_310 0.1238025584 - - PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Jatropha curcas]
19 Hb_001900_100 0.123839657 - - PREDICTED: uncharacterized protein LOC105632664 isoform X1 [Jatropha curcas]
20 Hb_005305_050 0.125505091 - - PREDICTED: armadillo repeat-containing protein 8 [Jatropha curcas]

Gene co-expression network

sample Hb_005914_140 Hb_005914_140 Hb_000928_190 Hb_000928_190 Hb_005914_140--Hb_000928_190 Hb_006683_020 Hb_006683_020 Hb_005914_140--Hb_006683_020 Hb_001318_050 Hb_001318_050 Hb_005914_140--Hb_001318_050 Hb_004094_020 Hb_004094_020 Hb_005914_140--Hb_004094_020 Hb_132880_040 Hb_132880_040 Hb_005914_140--Hb_132880_040 Hb_019280_010 Hb_019280_010 Hb_005914_140--Hb_019280_010 Hb_033152_070 Hb_033152_070 Hb_000928_190--Hb_033152_070 Hb_000258_240 Hb_000258_240 Hb_000928_190--Hb_000258_240 Hb_002781_030 Hb_002781_030 Hb_000928_190--Hb_002781_030 Hb_010042_020 Hb_010042_020 Hb_000928_190--Hb_010042_020 Hb_001481_150 Hb_001481_150 Hb_000928_190--Hb_001481_150 Hb_003988_050 Hb_003988_050 Hb_000928_190--Hb_003988_050 Hb_001097_040 Hb_001097_040 Hb_006683_020--Hb_001097_040 Hb_016734_010 Hb_016734_010 Hb_006683_020--Hb_016734_010 Hb_006683_020--Hb_019280_010 Hb_000683_050 Hb_000683_050 Hb_006683_020--Hb_000683_050 Hb_000701_030 Hb_000701_030 Hb_006683_020--Hb_000701_030 Hb_007383_020 Hb_007383_020 Hb_001318_050--Hb_007383_020 Hb_005648_010 Hb_005648_010 Hb_001318_050--Hb_005648_010 Hb_000025_190 Hb_000025_190 Hb_001318_050--Hb_000025_190 Hb_012678_020 Hb_012678_020 Hb_001318_050--Hb_012678_020 Hb_004880_150 Hb_004880_150 Hb_001318_050--Hb_004880_150 Hb_000800_090 Hb_000800_090 Hb_001318_050--Hb_000800_090 Hb_183867_010 Hb_183867_010 Hb_004094_020--Hb_183867_010 Hb_135757_020 Hb_135757_020 Hb_004094_020--Hb_135757_020 Hb_000494_030 Hb_000494_030 Hb_004094_020--Hb_000494_030 Hb_001006_270 Hb_001006_270 Hb_004094_020--Hb_001006_270 Hb_003994_220 Hb_003994_220 Hb_004094_020--Hb_003994_220 Hb_001157_200 Hb_001157_200 Hb_132880_040--Hb_001157_200 Hb_000035_390 Hb_000035_390 Hb_132880_040--Hb_000035_390 Hb_004677_050 Hb_004677_050 Hb_132880_040--Hb_004677_050 Hb_000046_170 Hb_000046_170 Hb_132880_040--Hb_000046_170 Hb_000984_170 Hb_000984_170 Hb_132880_040--Hb_000984_170 Hb_006452_120 Hb_006452_120 Hb_132880_040--Hb_006452_120 Hb_004450_070 Hb_004450_070 Hb_019280_010--Hb_004450_070 Hb_103684_010 Hb_103684_010 Hb_019280_010--Hb_103684_010 Hb_001500_100 Hb_001500_100 Hb_019280_010--Hb_001500_100 Hb_000237_050 Hb_000237_050 Hb_019280_010--Hb_000237_050 Hb_019280_010--Hb_004677_050 Hb_000085_450 Hb_000085_450 Hb_019280_010--Hb_000085_450
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.987999 2.92556 1.27877 6.01889 0.694477 1.71263
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.45119 1.99708 2.25253 5.06723 3.36711

CAGE analysis