Hb_005916_030

Information

Type -
Description -
Location Contig5916: 18039-19241
Sequence    

Annotation

kegg
ID rcu:RCOM_0715000
description hypothetical protein
nr
ID XP_012081739.1
description PREDICTED: uncharacterized protein At2g29880-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K3I9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18785 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005916_030 0.0 - - PREDICTED: uncharacterized protein At2g29880-like [Jatropha curcas]
2 Hb_000995_050 0.1337974549 - - 40S ribosomal protein S17C [Hevea brasiliensis]
3 Hb_000575_080 0.1340548566 - - PREDICTED: CD2 antigen cytoplasmic tail-binding protein 2 isoform X1 [Jatropha curcas]
4 Hb_005260_020 0.1438719937 - - PREDICTED: uncharacterized protein LOC105633789 [Jatropha curcas]
5 Hb_022461_010 0.1558174021 - - -
6 Hb_001054_130 0.1558696961 - - Protein SSU72, putative [Ricinus communis]
7 Hb_006502_080 0.1597536278 - - -
8 Hb_002046_040 0.1616602024 - - PREDICTED: topless-related protein 4 [Malus domestica]
9 Hb_000057_200 0.1645063735 - - PREDICTED: methyltransferase-like protein 22 [Jatropha curcas]
10 Hb_032927_010 0.1653284185 - - -
11 Hb_075964_010 0.1653389491 - - hypothetical protein JCGZ_20198 [Jatropha curcas]
12 Hb_000062_420 0.1658494746 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000364_150 0.1682695858 - - -
14 Hb_000156_130 0.169578799 - - hypothetical protein JCGZ_04605 [Jatropha curcas]
15 Hb_112356_040 0.1721200927 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
16 Hb_012799_130 0.1722817288 - - PREDICTED: flap endonuclease GEN-like 2 [Jatropha curcas]
17 Hb_022250_130 0.1728589199 - - inositol hexaphosphate kinase, putative [Ricinus communis]
18 Hb_000284_210 0.1743060114 - - conserved hypothetical protein [Ricinus communis]
19 Hb_171789_010 0.1750131889 - - phosphoenolpyruvate carboxylase [Glycine max]
20 Hb_002197_030 0.1753835233 - - PREDICTED: MATH domain-containing protein At5g43560-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_005916_030 Hb_005916_030 Hb_000995_050 Hb_000995_050 Hb_005916_030--Hb_000995_050 Hb_000575_080 Hb_000575_080 Hb_005916_030--Hb_000575_080 Hb_005260_020 Hb_005260_020 Hb_005916_030--Hb_005260_020 Hb_022461_010 Hb_022461_010 Hb_005916_030--Hb_022461_010 Hb_001054_130 Hb_001054_130 Hb_005916_030--Hb_001054_130 Hb_006502_080 Hb_006502_080 Hb_005916_030--Hb_006502_080 Hb_120221_010 Hb_120221_010 Hb_000995_050--Hb_120221_010 Hb_000453_260 Hb_000453_260 Hb_000995_050--Hb_000453_260 Hb_000156_130 Hb_000156_130 Hb_000995_050--Hb_000156_130 Hb_002259_030 Hb_002259_030 Hb_000995_050--Hb_002259_030 Hb_000510_090 Hb_000510_090 Hb_000995_050--Hb_000510_090 Hb_001307_140 Hb_001307_140 Hb_000575_080--Hb_001307_140 Hb_000270_020 Hb_000270_020 Hb_000575_080--Hb_000270_020 Hb_050455_010 Hb_050455_010 Hb_000575_080--Hb_050455_010 Hb_000088_020 Hb_000088_020 Hb_000575_080--Hb_000088_020 Hb_003299_090 Hb_003299_090 Hb_000575_080--Hb_003299_090 Hb_007317_190 Hb_007317_190 Hb_000575_080--Hb_007317_190 Hb_001430_120 Hb_001430_120 Hb_005260_020--Hb_001430_120 Hb_005333_070 Hb_005333_070 Hb_005260_020--Hb_005333_070 Hb_027295_010 Hb_027295_010 Hb_005260_020--Hb_027295_010 Hb_000205_160 Hb_000205_160 Hb_005260_020--Hb_000205_160 Hb_001489_150 Hb_001489_150 Hb_005260_020--Hb_001489_150 Hb_001358_030 Hb_001358_030 Hb_005260_020--Hb_001358_030 Hb_022461_010--Hb_001054_130 Hb_011828_020 Hb_011828_020 Hb_022461_010--Hb_011828_020 Hb_001477_130 Hb_001477_130 Hb_022461_010--Hb_001477_130 Hb_003266_050 Hb_003266_050 Hb_022461_010--Hb_003266_050 Hb_002374_160 Hb_002374_160 Hb_022461_010--Hb_002374_160 Hb_001048_020 Hb_001048_020 Hb_022461_010--Hb_001048_020 Hb_004055_140 Hb_004055_140 Hb_001054_130--Hb_004055_140 Hb_000157_030 Hb_000157_030 Hb_001054_130--Hb_000157_030 Hb_001054_130--Hb_003266_050 Hb_000057_200 Hb_000057_200 Hb_001054_130--Hb_000057_200 Hb_009117_030 Hb_009117_030 Hb_001054_130--Hb_009117_030 Hb_032927_010 Hb_032927_010 Hb_006502_080--Hb_032927_010 Hb_000812_040 Hb_000812_040 Hb_006502_080--Hb_000812_040 Hb_007012_020 Hb_007012_020 Hb_006502_080--Hb_007012_020 Hb_136731_010 Hb_136731_010 Hb_006502_080--Hb_136731_010 Hb_067776_010 Hb_067776_010 Hb_006502_080--Hb_067776_010 Hb_000329_770 Hb_000329_770 Hb_006502_080--Hb_000329_770
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.494401 0.806178 0.219977 0.214057 0.701259 2.92355
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.13336 1.35824 0.545006 0.957079 0.259523

CAGE analysis