Hb_005976_030

Information

Type -
Description -
Location Contig5976: 35516-37352
Sequence    

Annotation

kegg
ID tcc:TCM_000639
description CAA30379.1 protein, putative
nr
ID XP_012079239.1
description PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KJD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12405 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005976_030 0.0 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
2 Hb_000258_010 0.0050563351 - - lipid transfer precursor protein [Hevea brasiliensis]
3 Hb_001892_040 0.0128791624 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
4 Hb_069237_010 0.017375725 - - -
5 Hb_001591_020 0.0180372901 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
6 Hb_003729_040 0.0232322261 - - o-methyltransferase, putative [Ricinus communis]
7 Hb_000733_170 0.0239164044 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]
8 Hb_000530_080 0.027264455 - - PREDICTED: serine/threonine-protein kinase D6PKL2-like [Jatropha curcas]
9 Hb_130357_010 0.027444305 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
10 Hb_004032_170 0.0290875011 - - PREDICTED: indole-3-acetic acid-induced protein ARG7 [Jatropha curcas]
11 Hb_007432_040 0.0298408623 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 3-like [Jatropha curcas]
12 Hb_001347_020 0.0380014959 - - PREDICTED: cytochrome P450 86B1-like [Populus euphratica]
13 Hb_000422_100 0.0392667649 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
14 Hb_153199_010 0.0408836213 - - -
15 Hb_111442_010 0.0420904107 desease resistance Gene Name: AAA_16 LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
16 Hb_000325_090 0.0458658755 transcription factor TF Family: bHLH PREDICTED: transcription factor PRE5-like [Gossypium raimondii]
17 Hb_000628_090 0.0475487117 - - hypothetical protein B456_010G019400 [Gossypium raimondii]
18 Hb_054865_110 0.0488024157 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000194_040 0.049266517 - - carbonic anhydrase, putative [Ricinus communis]
20 Hb_000389_130 0.0519939068 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_005976_030 Hb_005976_030 Hb_000258_010 Hb_000258_010 Hb_005976_030--Hb_000258_010 Hb_001892_040 Hb_001892_040 Hb_005976_030--Hb_001892_040 Hb_069237_010 Hb_069237_010 Hb_005976_030--Hb_069237_010 Hb_001591_020 Hb_001591_020 Hb_005976_030--Hb_001591_020 Hb_003729_040 Hb_003729_040 Hb_005976_030--Hb_003729_040 Hb_000733_170 Hb_000733_170 Hb_005976_030--Hb_000733_170 Hb_000258_010--Hb_069237_010 Hb_000258_010--Hb_001892_040 Hb_000258_010--Hb_003729_040 Hb_130357_010 Hb_130357_010 Hb_000258_010--Hb_130357_010 Hb_000258_010--Hb_001591_020 Hb_001892_040--Hb_001591_020 Hb_001892_040--Hb_000733_170 Hb_000530_080 Hb_000530_080 Hb_001892_040--Hb_000530_080 Hb_004032_170 Hb_004032_170 Hb_001892_040--Hb_004032_170 Hb_007432_040 Hb_007432_040 Hb_001892_040--Hb_007432_040 Hb_069237_010--Hb_003729_040 Hb_069237_010--Hb_130357_010 Hb_001347_020 Hb_001347_020 Hb_069237_010--Hb_001347_020 Hb_000422_100 Hb_000422_100 Hb_069237_010--Hb_000422_100 Hb_001591_020--Hb_000733_170 Hb_001591_020--Hb_000530_080 Hb_001591_020--Hb_004032_170 Hb_001591_020--Hb_007432_040 Hb_003729_040--Hb_130357_010 Hb_003729_040--Hb_001347_020 Hb_003729_040--Hb_000422_100 Hb_111442_010 Hb_111442_010 Hb_003729_040--Hb_111442_010 Hb_000733_170--Hb_000530_080 Hb_000733_170--Hb_004032_170 Hb_000733_170--Hb_007432_040 Hb_153199_010 Hb_153199_010 Hb_000733_170--Hb_153199_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0171713 0.528584 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis