Hb_006006_070

Information

Type -
Description -
Location Contig6006: 115535-117049
Sequence    

Annotation

kegg
ID rcu:RCOM_0811180
description UDP-glucosyltransferase, putative (EC:2.4.1.210)
nr
ID XP_002518668.1
description UDP-glucosyltransferase, putative [Ricinus communis]
swissprot
ID Q66PF4
description Cinnamate beta-D-glucosyltransferase OS=Fragaria ananassa GN=GT2 PE=1 SV=1
trembl
ID B9RY84
description UDP-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_0811180 PE=3 SV=1
Gene Ontology
ID GO:0016758
description limonoid udp-glucosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50571: 115338-117090
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006006_070 0.0 - - UDP-glucosyltransferase, putative [Ricinus communis]
2 Hb_002110_270 0.0594732295 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
3 Hb_076895_020 0.0648870917 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X2 [Jatropha curcas]
4 Hb_000758_030 0.0730192765 transcription factor TF Family: ERF Ethylene-responsive transcription factor, putative [Ricinus communis]
5 Hb_002232_400 0.0749548002 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH25-like [Jatropha curcas]
6 Hb_000539_080 0.0783400951 - - hypothetical protein POPTR_0039s00260g, partial [Populus trichocarpa]
7 Hb_000441_170 0.0850415544 - - PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas]
8 Hb_002900_070 0.0927587777 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000948_070 0.0936491227 - - hypothetical protein POPTR_0016s01720g [Populus trichocarpa]
10 Hb_001405_100 0.0936566039 - - PREDICTED: lysM domain receptor-like kinase 4 [Jatropha curcas]
11 Hb_000238_060 0.0977363471 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
12 Hb_000984_080 0.0980680366 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
13 Hb_008225_080 0.1004977675 - - PREDICTED: cytochrome P450 71A26-like [Jatropha curcas]
14 Hb_002232_370 0.1005024023 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
15 Hb_000567_310 0.1018473852 - - Miraculin precursor, putative [Ricinus communis]
16 Hb_003786_060 0.1061411981 - - PREDICTED: transmembrane protein 220 [Jatropha curcas]
17 Hb_003052_070 0.1116437946 - - PREDICTED: peroxidase 11 [Jatropha curcas]
18 Hb_000081_020 0.1147926203 - - PREDICTED: protein NRT1/ PTR FAMILY 1.1-like [Camelina sativa]
19 Hb_006538_050 0.1154628544 - - hypothetical protein RCOM_1308310 [Ricinus communis]
20 Hb_032050_050 0.1164197076 - - PREDICTED: peroxidase 12-like [Jatropha curcas]

Gene co-expression network

sample Hb_006006_070 Hb_006006_070 Hb_002110_270 Hb_002110_270 Hb_006006_070--Hb_002110_270 Hb_076895_020 Hb_076895_020 Hb_006006_070--Hb_076895_020 Hb_000758_030 Hb_000758_030 Hb_006006_070--Hb_000758_030 Hb_002232_400 Hb_002232_400 Hb_006006_070--Hb_002232_400 Hb_000539_080 Hb_000539_080 Hb_006006_070--Hb_000539_080 Hb_000441_170 Hb_000441_170 Hb_006006_070--Hb_000441_170 Hb_002110_270--Hb_000758_030 Hb_002110_270--Hb_076895_020 Hb_002110_270--Hb_000539_080 Hb_000984_080 Hb_000984_080 Hb_002110_270--Hb_000984_080 Hb_002900_070 Hb_002900_070 Hb_002110_270--Hb_002900_070 Hb_076895_020--Hb_000539_080 Hb_027141_010 Hb_027141_010 Hb_076895_020--Hb_027141_010 Hb_076895_020--Hb_000984_080 Hb_076895_020--Hb_000758_030 Hb_008225_080 Hb_008225_080 Hb_000758_030--Hb_008225_080 Hb_000976_020 Hb_000976_020 Hb_000758_030--Hb_000976_020 Hb_000758_030--Hb_000539_080 Hb_002232_400--Hb_000441_170 Hb_002232_400--Hb_076895_020 Hb_002232_370 Hb_002232_370 Hb_002232_400--Hb_002232_370 Hb_002232_400--Hb_002900_070 Hb_000438_190 Hb_000438_190 Hb_002232_400--Hb_000438_190 Hb_000081_020 Hb_000081_020 Hb_000539_080--Hb_000081_020 Hb_000948_070 Hb_000948_070 Hb_000539_080--Hb_000948_070 Hb_000539_080--Hb_027141_010 Hb_000441_170--Hb_002900_070 Hb_002272_160 Hb_002272_160 Hb_000441_170--Hb_002272_160 Hb_098795_010 Hb_098795_010 Hb_000441_170--Hb_098795_010 Hb_000441_170--Hb_076895_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 33.0347 12.1227 25.9173 0 0.174568
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0617472 0.0242892 0.0456518 168.103 3.55848

CAGE analysis