Hb_006013_030

Information

Type -
Description -
Location Contig6013: 12585-13652
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006013_030 0.0 - - -
2 Hb_002733_050 0.0518168693 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
3 Hb_114121_010 0.0832933488 - - -
4 Hb_000959_370 0.0915557562 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
5 Hb_000280_120 0.0990831217 - - PREDICTED: uncharacterized protein LOC105643934 [Jatropha curcas]
6 Hb_168909_010 0.1008772819 - - PREDICTED: uncharacterized protein LOC105640156 [Jatropha curcas]
7 Hb_020400_010 0.1287977238 - - PREDICTED: uncharacterized protein LOC105644073 [Jatropha curcas]
8 Hb_138667_010 0.1291705078 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
9 Hb_000243_050 0.1342791598 - - ADP-ribosylation factor, putative [Ricinus communis]
10 Hb_110782_010 0.1357707196 - - PREDICTED: uncharacterized protein LOC105797448 [Gossypium raimondii]
11 Hb_008755_020 0.142938325 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_028872_040 0.1458142634 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_032299_070 0.1504119299 - - -
14 Hb_072173_010 0.1532071153 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 34 [Jatropha curcas]
15 Hb_006274_020 0.1599894495 - - structural constituent of cell wall, putative [Ricinus communis]
16 Hb_179183_010 0.1648005865 - - RALF-LIKE 32 family protein [Populus trichocarpa]
17 Hb_044313_010 0.1667095909 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002142_010 0.1691643339 - - conserved hypothetical protein [Ricinus communis]
19 Hb_019641_020 0.1696179289 - - hypothetical protein AALP_AAs49670U000100, partial [Arabis alpina]
20 Hb_001301_070 0.1786720957 - - -

Gene co-expression network

sample Hb_006013_030 Hb_006013_030 Hb_002733_050 Hb_002733_050 Hb_006013_030--Hb_002733_050 Hb_114121_010 Hb_114121_010 Hb_006013_030--Hb_114121_010 Hb_000959_370 Hb_000959_370 Hb_006013_030--Hb_000959_370 Hb_000280_120 Hb_000280_120 Hb_006013_030--Hb_000280_120 Hb_168909_010 Hb_168909_010 Hb_006013_030--Hb_168909_010 Hb_020400_010 Hb_020400_010 Hb_006013_030--Hb_020400_010 Hb_002733_050--Hb_114121_010 Hb_002733_050--Hb_168909_010 Hb_008755_020 Hb_008755_020 Hb_002733_050--Hb_008755_020 Hb_002733_050--Hb_000280_120 Hb_002733_050--Hb_020400_010 Hb_114121_010--Hb_168909_010 Hb_114121_010--Hb_008755_020 Hb_179183_010 Hb_179183_010 Hb_114121_010--Hb_179183_010 Hb_114121_010--Hb_000280_120 Hb_032299_070 Hb_032299_070 Hb_000959_370--Hb_032299_070 Hb_000959_370--Hb_002733_050 Hb_000600_080 Hb_000600_080 Hb_000959_370--Hb_000600_080 Hb_000959_370--Hb_000280_120 Hb_072173_010 Hb_072173_010 Hb_000959_370--Hb_072173_010 Hb_138667_010 Hb_138667_010 Hb_000280_120--Hb_138667_010 Hb_000243_050 Hb_000243_050 Hb_000280_120--Hb_000243_050 Hb_000280_120--Hb_168909_010 Hb_028872_040 Hb_028872_040 Hb_000280_120--Hb_028872_040 Hb_003938_100 Hb_003938_100 Hb_000280_120--Hb_003938_100 Hb_168909_010--Hb_000243_050 Hb_001301_070 Hb_001301_070 Hb_168909_010--Hb_001301_070 Hb_168909_010--Hb_179183_010 Hb_110782_010 Hb_110782_010 Hb_020400_010--Hb_110782_010 Hb_014967_010 Hb_014967_010 Hb_020400_010--Hb_014967_010 Hb_159404_010 Hb_159404_010 Hb_020400_010--Hb_159404_010 Hb_020400_010--Hb_008755_020 Hb_020400_010--Hb_114121_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.413279 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.585411 0.801548

CAGE analysis