Hb_006052_050

Information

Type -
Description -
Location Contig6052: 44043-52726
Sequence    

Annotation

kegg
ID gmx:100803781
description receptor-like protein 12-like
nr
ID KCW88181.1
description hypothetical protein EUGRSUZ_A00568 [Eucalyptus grandis]
swissprot
ID Q9LP24
description Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1
trembl
ID A0A059DCP6
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00568 PE=4 SV=1
Gene Ontology
ID GO:0016491
description receptor-like protein 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006052_050 0.0 - - hypothetical protein EUGRSUZ_A00568 [Eucalyptus grandis]
2 Hb_000915_220 0.1532830591 - - Lactoylglutathione lyase / glyoxalase I family protein [Theobroma cacao]
3 Hb_007590_040 0.1563805965 - - PREDICTED: vacuolar cation/proton exchanger 3-like [Jatropha curcas]
4 Hb_002995_030 0.1584035428 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002929_100 0.1622911001 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
6 Hb_030873_010 0.1715312293 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 isoform X2 [Cucumis sativus]
7 Hb_000119_050 0.1784201963 - - PREDICTED: transmembrane protein 45B-like [Jatropha curcas]
8 Hb_001850_010 0.1797080873 - - PREDICTED: cytochrome P450 71B34-like [Jatropha curcas]
9 Hb_000522_020 0.1815109239 - - PREDICTED: two-pore potassium channel 1 [Jatropha curcas]
10 Hb_002221_020 0.1821645489 - - hypothetical protein B456_008G083700 [Gossypium raimondii]
11 Hb_002025_370 0.185741841 - - monooxygenase, putative [Ricinus communis]
12 Hb_010327_010 0.1926613771 - - calcium ion binding protein, putative [Ricinus communis]
13 Hb_002571_050 0.1941434823 - - PREDICTED: cation/calcium exchanger 1 [Jatropha curcas]
14 Hb_000003_620 0.1984664562 - - PREDICTED: ABC transporter G family member 29-like [Jatropha curcas]
15 Hb_007371_020 0.1996965182 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]
16 Hb_000029_180 0.1997042652 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
17 Hb_002019_040 0.2003510661 - - hypothetical protein PRUPE_ppb016160mg, partial [Prunus persica]
18 Hb_001227_040 0.2004357585 - - PREDICTED: uncharacterized protein LOC104107451 [Nicotiana tomentosiformis]
19 Hb_007747_120 0.2020984757 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000333_120 0.203263279 - - PREDICTED: thiol protease aleurain-like [Jatropha curcas]

Gene co-expression network

sample Hb_006052_050 Hb_006052_050 Hb_000915_220 Hb_000915_220 Hb_006052_050--Hb_000915_220 Hb_007590_040 Hb_007590_040 Hb_006052_050--Hb_007590_040 Hb_002995_030 Hb_002995_030 Hb_006052_050--Hb_002995_030 Hb_002929_100 Hb_002929_100 Hb_006052_050--Hb_002929_100 Hb_030873_010 Hb_030873_010 Hb_006052_050--Hb_030873_010 Hb_000119_050 Hb_000119_050 Hb_006052_050--Hb_000119_050 Hb_002221_020 Hb_002221_020 Hb_000915_220--Hb_002221_020 Hb_000915_220--Hb_007590_040 Hb_067034_010 Hb_067034_010 Hb_000915_220--Hb_067034_010 Hb_002571_050 Hb_002571_050 Hb_000915_220--Hb_002571_050 Hb_001850_010 Hb_001850_010 Hb_000915_220--Hb_001850_010 Hb_000522_020 Hb_000522_020 Hb_007590_040--Hb_000522_020 Hb_000501_180 Hb_000501_180 Hb_007590_040--Hb_000501_180 Hb_007590_040--Hb_002221_020 Hb_007590_040--Hb_001850_010 Hb_015473_020 Hb_015473_020 Hb_007590_040--Hb_015473_020 Hb_126103_010 Hb_126103_010 Hb_002995_030--Hb_126103_010 Hb_001227_040 Hb_001227_040 Hb_002995_030--Hb_001227_040 Hb_000333_120 Hb_000333_120 Hb_002995_030--Hb_000333_120 Hb_010620_020 Hb_010620_020 Hb_002995_030--Hb_010620_020 Hb_000815_150 Hb_000815_150 Hb_002995_030--Hb_000815_150 Hb_017987_080 Hb_017987_080 Hb_002929_100--Hb_017987_080 Hb_004324_410 Hb_004324_410 Hb_002929_100--Hb_004324_410 Hb_002019_040 Hb_002019_040 Hb_002929_100--Hb_002019_040 Hb_002232_050 Hb_002232_050 Hb_002929_100--Hb_002232_050 Hb_001363_030 Hb_001363_030 Hb_002929_100--Hb_001363_030 Hb_030873_010--Hb_001850_010 Hb_030873_010--Hb_000119_050 Hb_030873_010--Hb_000522_020 Hb_030873_010--Hb_007590_040 Hb_030873_010--Hb_015473_020 Hb_028487_080 Hb_028487_080 Hb_030873_010--Hb_028487_080 Hb_000119_050--Hb_001850_010 Hb_001274_040 Hb_001274_040 Hb_000119_050--Hb_001274_040 Hb_000767_040 Hb_000767_040 Hb_000119_050--Hb_000767_040 Hb_000111_130 Hb_000111_130 Hb_000119_050--Hb_000111_130 Hb_005081_060 Hb_005081_060 Hb_000119_050--Hb_005081_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00479369 1.74404 0.0290924 0.0246768 0.027535 0.0376532
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0108593 0 0 0.196321 0.311319

CAGE analysis