Hb_006111_080

Information

Type -
Description -
Location Contig6111: 71143-75940
Sequence    

Annotation

kegg
ID rcu:RCOM_1077380
description hydrolase, putative
nr
ID KDP26912.1
description hypothetical protein JCGZ_18070 [Jatropha curcas]
swissprot
ID Q0WVZ1
description Putative metallophosphoesterase At3g03305 OS=Arabidopsis thaliana GN=At3g03305 PE=2 SV=1
trembl
ID A0A067JSP8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18070 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006111_080 0.0 - - hypothetical protein JCGZ_18070 [Jatropha curcas]
2 Hb_000441_150 0.1228859423 - - PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic isoform X2 [Jatropha curcas]
3 Hb_000329_650 0.1319817232 - - hypothetical protein POPTR_0014s056001g, partial [Populus trichocarpa]
4 Hb_015175_050 0.1342734847 - - PREDICTED: AT-hook motif nuclear-localized protein 10 isoform X3 [Jatropha curcas]
5 Hb_008864_090 0.1349752943 - - PREDICTED: plastid division protein PDV2-like [Jatropha curcas]
6 Hb_006788_020 0.1390937639 - - hypothetical protein JCGZ_21864 [Jatropha curcas]
7 Hb_119494_010 0.1461263962 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
8 Hb_166236_010 0.1474459033 - - -
9 Hb_000087_050 0.1479780243 - - hypothetical protein JCGZ_16227 [Jatropha curcas]
10 Hb_003253_050 0.1498250816 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 3 [Jatropha curcas]
11 Hb_003494_200 0.1512664513 - - PREDICTED: beta-1,3-galactosyltransferase 15-like [Jatropha curcas]
12 Hb_002344_060 0.1544159807 - - PREDICTED: methylthioribose-1-phosphate isomerase [Jatropha curcas]
13 Hb_002400_410 0.1559259334 - - PREDICTED: topless-related protein 1-like [Jatropha curcas]
14 Hb_000227_060 0.1566119703 transcription factor TF Family: NF-YC hypothetical protein POPTR_0010s03730g [Populus trichocarpa]
15 Hb_008147_070 0.1576692039 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
16 Hb_002641_030 0.1589052222 - - PREDICTED: flowering time control protein FCA isoform X1 [Jatropha curcas]
17 Hb_000031_120 0.1606409285 - - PREDICTED: uncharacterized protein LOC105637488 [Jatropha curcas]
18 Hb_062007_010 0.1619210555 - - PREDICTED: argininosuccinate lyase, chloroplastic [Jatropha curcas]
19 Hb_003294_070 0.1620785784 - - hypothetical protein RCOM_1714550 [Ricinus communis]
20 Hb_119530_010 0.1620964149 - - -

Gene co-expression network

sample Hb_006111_080 Hb_006111_080 Hb_000441_150 Hb_000441_150 Hb_006111_080--Hb_000441_150 Hb_000329_650 Hb_000329_650 Hb_006111_080--Hb_000329_650 Hb_015175_050 Hb_015175_050 Hb_006111_080--Hb_015175_050 Hb_008864_090 Hb_008864_090 Hb_006111_080--Hb_008864_090 Hb_006788_020 Hb_006788_020 Hb_006111_080--Hb_006788_020 Hb_119494_010 Hb_119494_010 Hb_006111_080--Hb_119494_010 Hb_002344_060 Hb_002344_060 Hb_000441_150--Hb_002344_060 Hb_000221_250 Hb_000221_250 Hb_000441_150--Hb_000221_250 Hb_000441_150--Hb_015175_050 Hb_010417_080 Hb_010417_080 Hb_000441_150--Hb_010417_080 Hb_000152_660 Hb_000152_660 Hb_000441_150--Hb_000152_660 Hb_002667_060 Hb_002667_060 Hb_000441_150--Hb_002667_060 Hb_000329_630 Hb_000329_630 Hb_000329_650--Hb_000329_630 Hb_000923_050 Hb_000923_050 Hb_000329_650--Hb_000923_050 Hb_000696_340 Hb_000696_340 Hb_000329_650--Hb_000696_340 Hb_005329_020 Hb_005329_020 Hb_000329_650--Hb_005329_020 Hb_005056_060 Hb_005056_060 Hb_000329_650--Hb_005056_060 Hb_002333_080 Hb_002333_080 Hb_000329_650--Hb_002333_080 Hb_015175_050--Hb_002344_060 Hb_011716_070 Hb_011716_070 Hb_015175_050--Hb_011716_070 Hb_015175_050--Hb_000221_250 Hb_001878_050 Hb_001878_050 Hb_015175_050--Hb_001878_050 Hb_015175_050--Hb_000152_660 Hb_008864_090--Hb_119494_010 Hb_001427_070 Hb_001427_070 Hb_008864_090--Hb_001427_070 Hb_010029_020 Hb_010029_020 Hb_008864_090--Hb_010029_020 Hb_077562_030 Hb_077562_030 Hb_008864_090--Hb_077562_030 Hb_008147_070 Hb_008147_070 Hb_008864_090--Hb_008147_070 Hb_014894_010 Hb_014894_010 Hb_008864_090--Hb_014894_010 Hb_004355_020 Hb_004355_020 Hb_006788_020--Hb_004355_020 Hb_000556_160 Hb_000556_160 Hb_006788_020--Hb_000556_160 Hb_000629_010 Hb_000629_010 Hb_006788_020--Hb_000629_010 Hb_011218_040 Hb_011218_040 Hb_006788_020--Hb_011218_040 Hb_000739_100 Hb_000739_100 Hb_006788_020--Hb_000739_100 Hb_000571_120 Hb_000571_120 Hb_006788_020--Hb_000571_120 Hb_003253_050 Hb_003253_050 Hb_119494_010--Hb_003253_050 Hb_002005_100 Hb_002005_100 Hb_119494_010--Hb_002005_100 Hb_002400_410 Hb_002400_410 Hb_119494_010--Hb_002400_410 Hb_119494_010--Hb_008147_070 Hb_119494_010--Hb_014894_010 Hb_001214_090 Hb_001214_090 Hb_119494_010--Hb_001214_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.274993 0.38701 0.150537 0.104222 0.115867 0.335244
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.468278 0.32966 0.183454 0.69489 0.163528

CAGE analysis