Hb_006111_090

Information

Type -
Description -
Location Contig6111: 77036-78738
Sequence    

Annotation

kegg
ID cic:CICLE_v10018189mg
description hypothetical protein
nr
ID KDP41807.1
description hypothetical protein JCGZ_26825 [Jatropha curcas]
swissprot
ID Q40392
description TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
trembl
ID A0A067L071
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26825 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_50992: 78400-78691
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006111_090 0.0 - - hypothetical protein JCGZ_26825 [Jatropha curcas]
2 Hb_008226_120 0.1665797221 - - ATP binding protein, putative [Ricinus communis]
3 Hb_000236_050 0.1740960936 - - phosphate transporter [Manihot esculenta]
4 Hb_009785_010 0.1751971033 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
5 Hb_000034_030 0.1792481934 - - protein phosphatase 2c, putative [Ricinus communis]
6 Hb_005237_040 0.1801346367 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
7 Hb_003497_020 0.1828360431 transcription factor TF Family: MYB MYB transcriptional factor [Populus nigra]
8 Hb_004884_200 0.1830322338 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
9 Hb_006736_010 0.1843674786 - - -
10 Hb_038670_010 0.1868613452 - - Major allergen Pru ar, putative [Ricinus communis]
11 Hb_001421_010 0.1869025918 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
12 Hb_000085_230 0.188676723 - - PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]
13 Hb_002173_060 0.1889058697 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
14 Hb_008783_020 0.1912559988 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
15 Hb_022501_020 0.192040594 - - AMP dependent CoA ligase, putative [Ricinus communis]
16 Hb_000317_220 0.1926805676 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000403_110 0.1938557136 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
18 Hb_000163_250 0.1946740587 - - unnamed protein product [Vitis vinifera]
19 Hb_003807_020 0.1964246584 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
20 Hb_175758_010 0.1966839062 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_006111_090 Hb_006111_090 Hb_008226_120 Hb_008226_120 Hb_006111_090--Hb_008226_120 Hb_000236_050 Hb_000236_050 Hb_006111_090--Hb_000236_050 Hb_009785_010 Hb_009785_010 Hb_006111_090--Hb_009785_010 Hb_000034_030 Hb_000034_030 Hb_006111_090--Hb_000034_030 Hb_005237_040 Hb_005237_040 Hb_006111_090--Hb_005237_040 Hb_003497_020 Hb_003497_020 Hb_006111_090--Hb_003497_020 Hb_001894_040 Hb_001894_040 Hb_008226_120--Hb_001894_040 Hb_038777_010 Hb_038777_010 Hb_008226_120--Hb_038777_010 Hb_001862_060 Hb_001862_060 Hb_008226_120--Hb_001862_060 Hb_008406_020 Hb_008406_020 Hb_008226_120--Hb_008406_020 Hb_009581_040 Hb_009581_040 Hb_008226_120--Hb_009581_040 Hb_012807_060 Hb_012807_060 Hb_008226_120--Hb_012807_060 Hb_000236_050--Hb_005237_040 Hb_000236_050--Hb_009785_010 Hb_014037_010 Hb_014037_010 Hb_000236_050--Hb_014037_010 Hb_004884_200 Hb_004884_200 Hb_000236_050--Hb_004884_200 Hb_005211_090 Hb_005211_090 Hb_000236_050--Hb_005211_090 Hb_002391_350 Hb_002391_350 Hb_000236_050--Hb_002391_350 Hb_009785_010--Hb_005237_040 Hb_009785_010--Hb_004884_200 Hb_009785_010--Hb_014037_010 Hb_006711_020 Hb_006711_020 Hb_009785_010--Hb_006711_020 Hb_009785_010--Hb_002391_350 Hb_001006_280 Hb_001006_280 Hb_000034_030--Hb_001006_280 Hb_000963_200 Hb_000963_200 Hb_000034_030--Hb_000963_200 Hb_000034_030--Hb_000236_050 Hb_038670_010 Hb_038670_010 Hb_000034_030--Hb_038670_010 Hb_000034_030--Hb_005237_040 Hb_001405_150 Hb_001405_150 Hb_000034_030--Hb_001405_150 Hb_005237_040--Hb_014037_010 Hb_005237_040--Hb_004884_200 Hb_005237_040--Hb_006711_020 Hb_005237_040--Hb_002391_350 Hb_006002_010 Hb_006002_010 Hb_003497_020--Hb_006002_010 Hb_003497_020--Hb_008226_120 Hb_004544_090 Hb_004544_090 Hb_003497_020--Hb_004544_090 Hb_003497_020--Hb_001894_040 Hb_000037_010 Hb_000037_010 Hb_003497_020--Hb_000037_010 Hb_000417_280 Hb_000417_280 Hb_003497_020--Hb_000417_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.25878 0.41583 0.62005 0.190707 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.155058 0 0 1.94164 0.446081

CAGE analysis