Hb_006120_100

Information

Type -
Description -
Location Contig6120: 50425-50887
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006120_100 0.0 - - -
2 Hb_007513_010 0.1853991374 - - -
3 Hb_000735_150 0.2411169191 - - hypothetical protein JCGZ_15322 [Jatropha curcas]
4 Hb_124518_010 0.2569937381 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
5 Hb_005357_090 0.2709895115 - - ubiquitin, putative [Ricinus communis]
6 Hb_001930_020 0.2734341727 - - PREDICTED: pectinesterase QRT1 [Jatropha curcas]
7 Hb_002357_050 0.2925699592 - - -
8 Hb_000392_390 0.2988917229 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
9 Hb_005078_030 0.3155401671 - - -
10 Hb_004757_030 0.3165249224 - - -
11 Hb_043674_060 0.3562296065 - - PREDICTED: uncharacterized protein LOC104240691 [Nicotiana sylvestris]
12 Hb_001903_080 0.3578764438 - - PREDICTED: probable carboxylesterase 18 [Jatropha curcas]
13 Hb_019654_080 0.3610989339 - - -
14 Hb_006938_070 0.3658252773 - - PREDICTED: uncharacterized protein LOC104893877 [Beta vulgaris subsp. vulgaris]
15 Hb_001318_090 0.3722560929 - - PREDICTED: zinc finger protein 598 [Jatropha curcas]
16 Hb_012725_080 0.3733244786 - - -
17 Hb_003752_050 0.3759433157 - - hypothetical protein JCGZ_15078 [Jatropha curcas]
18 Hb_132915_010 0.3813299299 - - PREDICTED: uncharacterized protein LOC103700431, partial [Phoenix dactylifera]
19 Hb_005714_110 0.3840932374 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Jatropha curcas]
20 Hb_000042_190 0.3859616123 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_006120_100 Hb_006120_100 Hb_007513_010 Hb_007513_010 Hb_006120_100--Hb_007513_010 Hb_000735_150 Hb_000735_150 Hb_006120_100--Hb_000735_150 Hb_124518_010 Hb_124518_010 Hb_006120_100--Hb_124518_010 Hb_005357_090 Hb_005357_090 Hb_006120_100--Hb_005357_090 Hb_001930_020 Hb_001930_020 Hb_006120_100--Hb_001930_020 Hb_002357_050 Hb_002357_050 Hb_006120_100--Hb_002357_050 Hb_007513_010--Hb_002357_050 Hb_007513_010--Hb_001930_020 Hb_007513_010--Hb_005357_090 Hb_005078_030 Hb_005078_030 Hb_007513_010--Hb_005078_030 Hb_004757_030 Hb_004757_030 Hb_007513_010--Hb_004757_030 Hb_000735_150--Hb_124518_010 Hb_000735_150--Hb_005357_090 Hb_000735_150--Hb_001930_020 Hb_000735_150--Hb_002357_050 Hb_000735_150--Hb_005078_030 Hb_000735_150--Hb_004757_030 Hb_124518_010--Hb_005357_090 Hb_124518_010--Hb_001930_020 Hb_124518_010--Hb_002357_050 Hb_124518_010--Hb_005078_030 Hb_124518_010--Hb_004757_030 Hb_005357_090--Hb_001930_020 Hb_005357_090--Hb_002357_050 Hb_005357_090--Hb_005078_030 Hb_005357_090--Hb_004757_030 Hb_001930_020--Hb_002357_050 Hb_001930_020--Hb_005078_030 Hb_001930_020--Hb_004757_030 Hb_002357_050--Hb_005078_030 Hb_002357_050--Hb_004757_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.332063 0.0590103 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.20855 0 0

CAGE analysis