Hb_006132_010

Information

Type -
Description -
Location Contig6132: 5000-5497
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0016301
description receptor protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006132_010 0.0 - - -
2 Hb_003207_030 0.1659157041 - - hypothetical protein VITISV_027754 [Vitis vinifera]
3 Hb_005532_020 0.18207782 - - PREDICTED: uncharacterized protein LOC100262861 [Vitis vinifera]
4 Hb_001411_050 0.1831341149 - - PREDICTED: uncharacterized protein LOC105640956 [Jatropha curcas]
5 Hb_004097_090 0.1917513449 - - PREDICTED: uncharacterized protein LOC105634517 [Jatropha curcas]
6 Hb_000473_120 0.1932935344 - - hypothetical protein JCGZ_16177 [Jatropha curcas]
7 Hb_000251_050 0.193376216 - - hypothetical protein JCGZ_21678 [Jatropha curcas]
8 Hb_078106_010 0.1957236366 - - seed maturation protein PM37 [Populus trichocarpa]
9 Hb_002559_030 0.2027315436 - - oxidoreductase, putative [Ricinus communis]
10 Hb_012799_190 0.2048832947 - - PREDICTED: uncharacterized protein LOC105648490 [Jatropha curcas]
11 Hb_000964_170 0.2053011684 - - Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis]
12 Hb_002099_060 0.206038665 - - Protein AFR, putative [Ricinus communis]
13 Hb_020805_120 0.2082308465 - - PREDICTED: glutamate receptor 3.3 [Jatropha curcas]
14 Hb_014361_090 0.2095889144 - - acyl-CoA binding protein 3A [Vernicia fordii]
15 Hb_032631_020 0.2108993411 - - glycine-rich family protein [Populus trichocarpa]
16 Hb_105033_010 0.2124504046 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X2 [Jatropha curcas]
17 Hb_001998_220 0.2136030867 - - PREDICTED: isoamylase 1, chloroplastic [Jatropha curcas]
18 Hb_000976_130 0.2148609305 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
19 Hb_000350_030 0.2151000992 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00277 [Jatropha curcas]
20 Hb_002110_090 0.2163534135 - - PREDICTED: transport inhibitor response 1-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_006132_010 Hb_006132_010 Hb_003207_030 Hb_003207_030 Hb_006132_010--Hb_003207_030 Hb_005532_020 Hb_005532_020 Hb_006132_010--Hb_005532_020 Hb_001411_050 Hb_001411_050 Hb_006132_010--Hb_001411_050 Hb_004097_090 Hb_004097_090 Hb_006132_010--Hb_004097_090 Hb_000473_120 Hb_000473_120 Hb_006132_010--Hb_000473_120 Hb_000251_050 Hb_000251_050 Hb_006132_010--Hb_000251_050 Hb_000976_130 Hb_000976_130 Hb_003207_030--Hb_000976_130 Hb_012799_190 Hb_012799_190 Hb_003207_030--Hb_012799_190 Hb_002085_080 Hb_002085_080 Hb_003207_030--Hb_002085_080 Hb_032631_020 Hb_032631_020 Hb_003207_030--Hb_032631_020 Hb_008616_040 Hb_008616_040 Hb_003207_030--Hb_008616_040 Hb_000665_270 Hb_000665_270 Hb_003207_030--Hb_000665_270 Hb_002552_010 Hb_002552_010 Hb_005532_020--Hb_002552_010 Hb_002110_170 Hb_002110_170 Hb_005532_020--Hb_002110_170 Hb_105033_010 Hb_105033_010 Hb_005532_020--Hb_105033_010 Hb_001059_060 Hb_001059_060 Hb_005532_020--Hb_001059_060 Hb_003849_120 Hb_003849_120 Hb_005532_020--Hb_003849_120 Hb_009078_020 Hb_009078_020 Hb_005532_020--Hb_009078_020 Hb_001579_200 Hb_001579_200 Hb_001411_050--Hb_001579_200 Hb_000359_220 Hb_000359_220 Hb_001411_050--Hb_000359_220 Hb_006916_030 Hb_006916_030 Hb_001411_050--Hb_006916_030 Hb_006846_080 Hb_006846_080 Hb_001411_050--Hb_006846_080 Hb_004225_040 Hb_004225_040 Hb_001411_050--Hb_004225_040 Hb_001140_180 Hb_001140_180 Hb_001411_050--Hb_001140_180 Hb_000300_510 Hb_000300_510 Hb_004097_090--Hb_000300_510 Hb_001627_040 Hb_001627_040 Hb_004097_090--Hb_001627_040 Hb_005192_010 Hb_005192_010 Hb_004097_090--Hb_005192_010 Hb_000417_170 Hb_000417_170 Hb_004097_090--Hb_000417_170 Hb_001421_090 Hb_001421_090 Hb_004097_090--Hb_001421_090 Hb_000120_860 Hb_000120_860 Hb_004097_090--Hb_000120_860 Hb_031089_050 Hb_031089_050 Hb_000473_120--Hb_031089_050 Hb_011828_010 Hb_011828_010 Hb_000473_120--Hb_011828_010 Hb_001998_220 Hb_001998_220 Hb_000473_120--Hb_001998_220 Hb_020805_120 Hb_020805_120 Hb_000473_120--Hb_020805_120 Hb_003006_080 Hb_003006_080 Hb_000473_120--Hb_003006_080 Hb_002311_130 Hb_002311_130 Hb_000473_120--Hb_002311_130 Hb_001269_520 Hb_001269_520 Hb_000251_050--Hb_001269_520 Hb_002110_090 Hb_002110_090 Hb_000251_050--Hb_002110_090 Hb_049293_010 Hb_049293_010 Hb_000251_050--Hb_049293_010 Hb_002099_060 Hb_002099_060 Hb_000251_050--Hb_002099_060 Hb_001195_250 Hb_001195_250 Hb_000251_050--Hb_001195_250 Hb_000418_150 Hb_000418_150 Hb_000251_050--Hb_000418_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.06031 0.639896 1.44979 0.570112 0.37594
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.1351 0.212271 0 0.441389 1.9824

CAGE analysis