Hb_006185_060

Information

Type -
Description -
Location Contig6185: 86287-89905
Sequence    

Annotation

kegg
ID rcu:RCOM_0654770
description protein phosphatase 2c, putative (EC:3.1.3.16)
nr
ID XP_012068927.1
description PREDICTED: protein phosphatase 2C 16 [Jatropha curcas]
swissprot
ID Q9CAJ0
description Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1
trembl
ID A0A067KX96
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24736 PE=3 SV=1
Gene Ontology
ID GO:0004722
description protein phosphatase 2c 16

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51343: 86351-90045 , PASA_asmbl_51344: 86937-87442
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006185_060 0.0 - - PREDICTED: protein phosphatase 2C 16 [Jatropha curcas]
2 Hb_011161_020 0.0638101604 - - PREDICTED: DIS3-like exonuclease 2 [Jatropha curcas]
3 Hb_000120_660 0.0760644874 - - PREDICTED: epidermal growth factor receptor substrate 15-like 1 [Jatropha curcas]
4 Hb_000122_220 0.0869651841 - - Prenylated Rab acceptor protein, putative [Ricinus communis]
5 Hb_000574_420 0.0873841271 - - PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Jatropha curcas]
6 Hb_002329_020 0.088359121 - - PREDICTED: uncharacterized protein LOC105648015 [Jatropha curcas]
7 Hb_000479_070 0.0892398156 - - PREDICTED: uncharacterized protein LOC105644141 [Jatropha curcas]
8 Hb_003729_030 0.090549887 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Jatropha curcas]
9 Hb_002267_140 0.0944399857 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
10 Hb_011242_060 0.0960322438 transcription factor TF Family: SNF2 Chromo domain protein, putative [Ricinus communis]
11 Hb_000028_510 0.0964270603 - - PREDICTED: uncharacterized protein LOC105640819 [Jatropha curcas]
12 Hb_008253_030 0.0979125168 - - PREDICTED: probable carboxylesterase 11 [Jatropha curcas]
13 Hb_000977_120 0.0980459161 - - PREDICTED: sister chromatid cohesion 1 protein 4 isoform X2 [Jatropha curcas]
14 Hb_001322_130 0.0980879822 - - PREDICTED: putative glycerol-3-phosphate transporter 4 [Jatropha curcas]
15 Hb_000358_200 0.0991211707 - - PREDICTED: uncharacterized protein LOC105637771 [Jatropha curcas]
16 Hb_010417_070 0.0995800461 - - PREDICTED: uncharacterized protein LOC105645744 isoform X1 [Jatropha curcas]
17 Hb_001231_090 0.0995972393 - - PREDICTED: CCR4-NOT transcription complex subunit 10 isoform X1 [Jatropha curcas]
18 Hb_004483_040 0.0997765153 - - hypothetical protein JCGZ_22047 [Jatropha curcas]
19 Hb_000265_090 0.0999664441 - - PREDICTED: flowering time control protein FPA [Jatropha curcas]
20 Hb_000941_030 0.1006847811 - - PREDICTED: uncharacterized protein LOC105646531 [Jatropha curcas]

Gene co-expression network

sample Hb_006185_060 Hb_006185_060 Hb_011161_020 Hb_011161_020 Hb_006185_060--Hb_011161_020 Hb_000120_660 Hb_000120_660 Hb_006185_060--Hb_000120_660 Hb_000122_220 Hb_000122_220 Hb_006185_060--Hb_000122_220 Hb_000574_420 Hb_000574_420 Hb_006185_060--Hb_000574_420 Hb_002329_020 Hb_002329_020 Hb_006185_060--Hb_002329_020 Hb_000479_070 Hb_000479_070 Hb_006185_060--Hb_000479_070 Hb_011161_020--Hb_000574_420 Hb_003047_020 Hb_003047_020 Hb_011161_020--Hb_003047_020 Hb_009302_030 Hb_009302_030 Hb_011161_020--Hb_009302_030 Hb_004236_010 Hb_004236_010 Hb_011161_020--Hb_004236_010 Hb_011161_020--Hb_000122_220 Hb_003729_030 Hb_003729_030 Hb_000120_660--Hb_003729_030 Hb_004629_010 Hb_004629_010 Hb_000120_660--Hb_004629_010 Hb_157966_010 Hb_157966_010 Hb_000120_660--Hb_157966_010 Hb_005104_010 Hb_005104_010 Hb_000120_660--Hb_005104_010 Hb_000780_170 Hb_000780_170 Hb_000120_660--Hb_000780_170 Hb_008253_030 Hb_008253_030 Hb_000120_660--Hb_008253_030 Hb_000358_200 Hb_000358_200 Hb_000122_220--Hb_000358_200 Hb_004659_090 Hb_004659_090 Hb_000122_220--Hb_004659_090 Hb_001231_090 Hb_001231_090 Hb_000122_220--Hb_001231_090 Hb_002687_090 Hb_002687_090 Hb_000122_220--Hb_002687_090 Hb_004032_040 Hb_004032_040 Hb_000574_420--Hb_004032_040 Hb_012368_100 Hb_012368_100 Hb_000574_420--Hb_012368_100 Hb_000347_120 Hb_000347_120 Hb_000574_420--Hb_000347_120 Hb_000941_030 Hb_000941_030 Hb_000574_420--Hb_000941_030 Hb_000061_030 Hb_000061_030 Hb_002329_020--Hb_000061_030 Hb_001279_120 Hb_001279_120 Hb_002329_020--Hb_001279_120 Hb_002267_140 Hb_002267_140 Hb_002329_020--Hb_002267_140 Hb_002085_030 Hb_002085_030 Hb_002329_020--Hb_002085_030 Hb_012194_030 Hb_012194_030 Hb_002329_020--Hb_012194_030 Hb_001754_030 Hb_001754_030 Hb_002329_020--Hb_001754_030 Hb_001473_110 Hb_001473_110 Hb_000479_070--Hb_001473_110 Hb_001545_150 Hb_001545_150 Hb_000479_070--Hb_001545_150 Hb_003918_030 Hb_003918_030 Hb_000479_070--Hb_003918_030 Hb_031042_050 Hb_031042_050 Hb_000479_070--Hb_031042_050 Hb_000479_070--Hb_001279_120 Hb_001488_180 Hb_001488_180 Hb_000479_070--Hb_001488_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
53.1235 96.404 45.8722 38.1526 38.7995 50.0899
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.4024 17.8937 44.3469 32.6912 48.9216

CAGE analysis