Hb_006210_010

Information

Type -
Description -
Location Contig6210: 21662-33097
Sequence    

Annotation

kegg
ID rcu:RCOM_1618780
description acetyl-CoA synthetase, putative (EC:6.2.1.1)
nr
ID XP_012092926.1
description PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Jatropha curcas]
swissprot
ID F4KBF3
description Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana GN=AAE17 PE=2 SV=1
trembl
ID A0A067JKP5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05828 PE=4 SV=1
Gene Ontology
ID GO:0003824
description probable acyl-activating enzyme peroxisomal

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51518: 21899-32261 , PASA_asmbl_51519: 31911-32166
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006210_010 0.0 - - PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Jatropha curcas]
2 Hb_001008_130 0.0575047833 transcription factor TF Family: mTERF PREDICTED: cytochrome c1-2, heme protein, mitochondrial-like [Elaeis guineensis]
3 Hb_006663_060 0.0601072715 - - PREDICTED: calcium homeostasis endoplasmic reticulum protein [Jatropha curcas]
4 Hb_000059_240 0.0653953252 - - PREDICTED: protein FRIGIDA [Jatropha curcas]
5 Hb_003680_020 0.0662757148 - - UDP-glucosyltransferase, putative [Ricinus communis]
6 Hb_001141_240 0.0670720401 - - PREDICTED: folate-biopterin transporter 1, chloroplastic [Jatropha curcas]
7 Hb_001811_170 0.0718980414 - - dynamin, putative [Ricinus communis]
8 Hb_048476_080 0.0763584839 transcription factor TF Family: ARR-B two-component sensor histidine kinase bacteria, putative [Ricinus communis]
9 Hb_000960_080 0.0765458919 - - PREDICTED: topless-related protein 1-like isoform X2 [Jatropha curcas]
10 Hb_001541_150 0.0810063487 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000270_170 0.0817393977 - - PREDICTED: formin-like protein 5 [Jatropha curcas]
12 Hb_006100_020 0.0824374237 - - PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Jatropha curcas]
13 Hb_073171_070 0.0829294549 - - PREDICTED: RNA polymerase II-associated factor 1 homolog [Jatropha curcas]
14 Hb_000103_290 0.0838245498 - - PREDICTED: dymeclin isoform X1 [Jatropha curcas]
15 Hb_033312_130 0.0841647607 - - PREDICTED: protein TIC 40, chloroplastic [Jatropha curcas]
16 Hb_001507_050 0.0845282179 - - PREDICTED: cysteine desulfurase 1, chloroplastic isoform X1 [Jatropha curcas]
17 Hb_005260_030 0.0857011175 - - PREDICTED: uncharacterized protein LOC105633782 [Jatropha curcas]
18 Hb_009288_020 0.0859735225 - - PREDICTED: protein FRIGIDA [Jatropha curcas]
19 Hb_004957_030 0.0863505355 - - hydroxyproline-rich glycoprotein [Populus trichocarpa]
20 Hb_004218_180 0.0871402812 - - PREDICTED: flowering time control protein FY isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_006210_010 Hb_006210_010 Hb_001008_130 Hb_001008_130 Hb_006210_010--Hb_001008_130 Hb_006663_060 Hb_006663_060 Hb_006210_010--Hb_006663_060 Hb_000059_240 Hb_000059_240 Hb_006210_010--Hb_000059_240 Hb_003680_020 Hb_003680_020 Hb_006210_010--Hb_003680_020 Hb_001141_240 Hb_001141_240 Hb_006210_010--Hb_001141_240 Hb_001811_170 Hb_001811_170 Hb_006210_010--Hb_001811_170 Hb_033312_130 Hb_033312_130 Hb_001008_130--Hb_033312_130 Hb_006100_020 Hb_006100_020 Hb_001008_130--Hb_006100_020 Hb_048476_080 Hb_048476_080 Hb_001008_130--Hb_048476_080 Hb_001008_130--Hb_003680_020 Hb_000960_080 Hb_000960_080 Hb_001008_130--Hb_000960_080 Hb_009288_020 Hb_009288_020 Hb_006663_060--Hb_009288_020 Hb_073171_070 Hb_073171_070 Hb_006663_060--Hb_073171_070 Hb_003040_050 Hb_003040_050 Hb_006663_060--Hb_003040_050 Hb_002874_110 Hb_002874_110 Hb_006663_060--Hb_002874_110 Hb_000568_050 Hb_000568_050 Hb_006663_060--Hb_000568_050 Hb_000059_240--Hb_000960_080 Hb_000059_240--Hb_003680_020 Hb_000318_150 Hb_000318_150 Hb_000059_240--Hb_000318_150 Hb_000059_240--Hb_033312_130 Hb_007904_300 Hb_007904_300 Hb_000059_240--Hb_007904_300 Hb_003680_020--Hb_000960_080 Hb_000844_050 Hb_000844_050 Hb_003680_020--Hb_000844_050 Hb_001507_050 Hb_001507_050 Hb_003680_020--Hb_001507_050 Hb_003661_010 Hb_003661_010 Hb_003680_020--Hb_003661_010 Hb_003680_020--Hb_048476_080 Hb_001141_240--Hb_006100_020 Hb_000815_300 Hb_000815_300 Hb_001141_240--Hb_000815_300 Hb_000139_080 Hb_000139_080 Hb_001141_240--Hb_000139_080 Hb_001141_240--Hb_001811_170 Hb_006970_020 Hb_006970_020 Hb_001141_240--Hb_006970_020 Hb_001226_130 Hb_001226_130 Hb_001811_170--Hb_001226_130 Hb_000342_050 Hb_000342_050 Hb_001811_170--Hb_000342_050 Hb_001587_030 Hb_001587_030 Hb_001811_170--Hb_001587_030 Hb_001085_080 Hb_001085_080 Hb_001811_170--Hb_001085_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.59193 8.28386 7.17777 10.5225 3.6439 3.58688
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.89218 4.07301 3.51032 9.09064 12.61

CAGE analysis