Hb_006272_010

Information

Type -
Description -
Location Contig6272: 5599-5887
Sequence    

Annotation

kegg
ID vvi:100250831
description cytochrome P450 86B1
nr
ID XP_002275905.2
description PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
swissprot
ID Q9FVS9
description Alkane hydroxylase MAH1 OS=Arabidopsis thaliana GN=CYP96A15 PE=2 SV=1
trembl
ID A0A067LD51
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10251 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 86b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006272_010 0.0 - - PREDICTED: cytochrome P450 86B1 [Vitis vinifera]
2 Hb_005171_020 0.0193144506 transcription factor TF Family: C2C2-Dof PREDICTED: dof zinc finger protein DOF5.7 [Jatropha curcas]
3 Hb_001715_050 0.0227510907 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Jatropha curcas]
4 Hb_043327_010 0.0294128381 - - PREDICTED: uncharacterized protein LOC105785093, partial [Gossypium raimondii]
5 Hb_083242_040 0.0333897349 - - -
6 Hb_003228_060 0.0412050775 - - conserved hypothetical protein [Ricinus communis]
7 Hb_183479_030 0.0488602402 - - Photosystem I reaction center subunit V, chloroplast precursor, putative [Ricinus communis]
8 Hb_002997_060 0.0521328405 - - hypothetical protein POPTR_0011s10730g [Populus trichocarpa]
9 Hb_000696_200 0.0530912557 - - PREDICTED: GDSL esterase/lipase EXL3-like [Jatropha curcas]
10 Hb_048694_010 0.0692132588 - - catalytic, putative [Ricinus communis]
11 Hb_006331_010 0.0706194761 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
12 Hb_000504_220 0.0754235471 - - hypothetical protein JCGZ_10249 [Jatropha curcas]
13 Hb_034168_060 0.0759013725 - - ribulose-1-5-bisphosphate carboxylase/oxygenase large subunit, partial (chloroplast) [Cucumis argenteus]
14 Hb_003952_030 0.0764396946 - - hypothetical protein JCGZ_16620 [Jatropha curcas]
15 Hb_003947_020 0.0825045783 - - Serine/threonine-protein kinase-transforming protein raf, putative [Ricinus communis]
16 Hb_009095_020 0.0826447144 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1, partial [Populus euphratica]
17 Hb_007594_020 0.0842221503 - - hypothetical protein JCGZ_18350 [Jatropha curcas]
18 Hb_001081_070 0.0863163406 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
19 Hb_008489_030 0.0873506929 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
20 Hb_001089_120 0.0932714833 - - PREDICTED: pectinesterase [Jatropha curcas]

Gene co-expression network

sample Hb_006272_010 Hb_006272_010 Hb_005171_020 Hb_005171_020 Hb_006272_010--Hb_005171_020 Hb_001715_050 Hb_001715_050 Hb_006272_010--Hb_001715_050 Hb_043327_010 Hb_043327_010 Hb_006272_010--Hb_043327_010 Hb_083242_040 Hb_083242_040 Hb_006272_010--Hb_083242_040 Hb_003228_060 Hb_003228_060 Hb_006272_010--Hb_003228_060 Hb_183479_030 Hb_183479_030 Hb_006272_010--Hb_183479_030 Hb_005171_020--Hb_043327_010 Hb_005171_020--Hb_001715_050 Hb_002997_060 Hb_002997_060 Hb_005171_020--Hb_002997_060 Hb_005171_020--Hb_083242_040 Hb_005171_020--Hb_003228_060 Hb_001715_050--Hb_083242_040 Hb_001715_050--Hb_003228_060 Hb_000696_200 Hb_000696_200 Hb_001715_050--Hb_000696_200 Hb_001715_050--Hb_043327_010 Hb_043327_010--Hb_002997_060 Hb_000504_220 Hb_000504_220 Hb_043327_010--Hb_000504_220 Hb_043327_010--Hb_183479_030 Hb_083242_040--Hb_003228_060 Hb_083242_040--Hb_000696_200 Hb_034168_060 Hb_034168_060 Hb_083242_040--Hb_034168_060 Hb_003228_060--Hb_000696_200 Hb_003228_060--Hb_002997_060 Hb_003228_060--Hb_034168_060 Hb_183479_030--Hb_005171_020 Hb_003952_030 Hb_003952_030 Hb_183479_030--Hb_003952_030 Hb_002600_110 Hb_002600_110 Hb_183479_030--Hb_002600_110 Hb_183479_030--Hb_001715_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.34246 2.32585 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 23.8415

CAGE analysis