Hb_006326_020

Information

Type -
Description -
Location Contig6326: 3493-3759
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006326_020 0.0 - - -
2 Hb_007007_020 0.1116128587 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001975_170 0.1203777923 - - PREDICTED: vacuolar protein sorting-associated protein 26A [Nelumbo nucifera]
4 Hb_007017_130 0.1203792928 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6-like isoform X1 [Populus euphratica]
5 Hb_004634_010 0.1204044434 - - hypothetical protein POPTR_0002s23100g [Populus trichocarpa]
6 Hb_099777_010 0.1207025983 - - PREDICTED: uncharacterized protein LOC104884611 [Beta vulgaris subsp. vulgaris]
7 Hb_000967_070 0.1208676437 - - rubber peroxidase 1 [Hevea brasiliensis]
8 Hb_003589_040 0.1217148162 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
9 Hb_004375_040 0.121873442 - - hypothetical protein JCGZ_13965 [Jatropha curcas]
10 Hb_000108_010 0.1218742548 - - hypothetical protein POPTR_0016s06140g, partial [Populus trichocarpa]
11 Hb_000996_090 0.121988461 transcription factor TF Family: NF-YC ccaat-binding transcription factor, putative [Ricinus communis]
12 Hb_150263_030 0.1227150369 - - conserved hypothetical protein [Ricinus communis]
13 Hb_131029_010 0.1243836178 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
14 Hb_060231_020 0.1266158615 - - PREDICTED: peroxisomal membrane protein PMP22 [Jatropha curcas]
15 Hb_025519_010 0.1272556718 - - PREDICTED: uncharacterized protein LOC103485710 [Cucumis melo]
16 Hb_000563_620 0.1278454852 - - hypothetical protein JCGZ_18889 [Jatropha curcas]
17 Hb_034661_050 0.129469312 - - PREDICTED: zinc finger MYM-type protein 1-like, partial [Malus domestica]
18 Hb_017226_020 0.1301270675 transcription factor TF Family: MYB hypothetical protein JCGZ_06720 [Jatropha curcas]
19 Hb_034507_020 0.1305588548 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
20 Hb_002413_030 0.1337827494 - - sulfate transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_006326_020 Hb_006326_020 Hb_007007_020 Hb_007007_020 Hb_006326_020--Hb_007007_020 Hb_001975_170 Hb_001975_170 Hb_006326_020--Hb_001975_170 Hb_007017_130 Hb_007017_130 Hb_006326_020--Hb_007017_130 Hb_004634_010 Hb_004634_010 Hb_006326_020--Hb_004634_010 Hb_099777_010 Hb_099777_010 Hb_006326_020--Hb_099777_010 Hb_000967_070 Hb_000967_070 Hb_006326_020--Hb_000967_070 Hb_002413_030 Hb_002413_030 Hb_007007_020--Hb_002413_030 Hb_082733_010 Hb_082733_010 Hb_007007_020--Hb_082733_010 Hb_060236_010 Hb_060236_010 Hb_007007_020--Hb_060236_010 Hb_003057_040 Hb_003057_040 Hb_007007_020--Hb_003057_040 Hb_001091_010 Hb_001091_010 Hb_007007_020--Hb_001091_010 Hb_001975_170--Hb_007017_130 Hb_001975_170--Hb_004634_010 Hb_001975_170--Hb_099777_010 Hb_001975_170--Hb_000967_070 Hb_003589_040 Hb_003589_040 Hb_001975_170--Hb_003589_040 Hb_004375_040 Hb_004375_040 Hb_001975_170--Hb_004375_040 Hb_007017_130--Hb_004634_010 Hb_007017_130--Hb_099777_010 Hb_007017_130--Hb_000967_070 Hb_007017_130--Hb_003589_040 Hb_000996_090 Hb_000996_090 Hb_007017_130--Hb_000996_090 Hb_004634_010--Hb_099777_010 Hb_004634_010--Hb_000967_070 Hb_004634_010--Hb_000996_090 Hb_004634_010--Hb_003589_040 Hb_099777_010--Hb_000996_090 Hb_099777_010--Hb_000967_070 Hb_099777_010--Hb_003589_040 Hb_000967_070--Hb_003589_040 Hb_000967_070--Hb_004375_040 Hb_000108_010 Hb_000108_010 Hb_000967_070--Hb_000108_010 Hb_150263_030 Hb_150263_030 Hb_000967_070--Hb_150263_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.74624 0 40.7479 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 18.3916 0

CAGE analysis