Hb_006344_010

Information

Type -
Description -
Location Contig6344: 2454-12486
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006344_010 0.0 - - -
2 Hb_140572_010 0.1989134524 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Jatropha curcas]
3 Hb_001021_060 0.2138817366 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
4 Hb_001195_390 0.229376593 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Populus euphratica]
5 Hb_004413_030 0.2331842246 - - Retrotransposon protein, putative [Theobroma cacao]
6 Hb_001277_310 0.2413573693 - - PREDICTED: putative ribonuclease H protein At1g65750 [Phoenix dactylifera]
7 Hb_135624_010 0.2535404402 - - PREDICTED: inositol transporter 4-like [Jatropha curcas]
8 Hb_007753_020 0.2623595539 - - -
9 Hb_123521_010 0.2775348019 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
10 Hb_001009_130 0.2793405132 - - hypothetical protein JCGZ_11336 [Jatropha curcas]
11 Hb_008147_010 0.2865443774 - - hypothetical protein, partial [Pseudomonas fluorescens]
12 Hb_002028_100 0.291936817 - - PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
13 Hb_004079_020 0.2935930712 - - hypothetical protein glysoja_031528 [Glycine soja]
14 Hb_003446_040 0.2952388366 - - -
15 Hb_005914_240 0.3036701826 - - PREDICTED: oxidation resistance protein 1 [Jatropha curcas]
16 Hb_002232_450 0.3198949502 - - PREDICTED: probable methyltransferase PMT11 [Jatropha curcas]
17 Hb_002243_040 0.3243822137 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_00227 [Jatropha curcas]
18 Hb_002733_030 0.3252165519 - - PREDICTED: uncharacterized protein LOC104248159 [Nicotiana sylvestris]
19 Hb_015707_010 0.3438368611 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
20 Hb_000922_130 0.3447540429 - - hypothetical protein POPTR_0008s04925g [Populus trichocarpa]

Gene co-expression network

sample Hb_006344_010 Hb_006344_010 Hb_140572_010 Hb_140572_010 Hb_006344_010--Hb_140572_010 Hb_001021_060 Hb_001021_060 Hb_006344_010--Hb_001021_060 Hb_001195_390 Hb_001195_390 Hb_006344_010--Hb_001195_390 Hb_004413_030 Hb_004413_030 Hb_006344_010--Hb_004413_030 Hb_001277_310 Hb_001277_310 Hb_006344_010--Hb_001277_310 Hb_135624_010 Hb_135624_010 Hb_006344_010--Hb_135624_010 Hb_007753_020 Hb_007753_020 Hb_140572_010--Hb_007753_020 Hb_140572_010--Hb_001021_060 Hb_140572_010--Hb_001195_390 Hb_000445_080 Hb_000445_080 Hb_140572_010--Hb_000445_080 Hb_123521_010 Hb_123521_010 Hb_140572_010--Hb_123521_010 Hb_000252_030 Hb_000252_030 Hb_001021_060--Hb_000252_030 Hb_003952_140 Hb_003952_140 Hb_001021_060--Hb_003952_140 Hb_005914_240 Hb_005914_240 Hb_001021_060--Hb_005914_240 Hb_001021_060--Hb_007753_020 Hb_002243_040 Hb_002243_040 Hb_001195_390--Hb_002243_040 Hb_013925_010 Hb_013925_010 Hb_001195_390--Hb_013925_010 Hb_046440_010 Hb_046440_010 Hb_001195_390--Hb_046440_010 Hb_000160_200 Hb_000160_200 Hb_001195_390--Hb_000160_200 Hb_004413_030--Hb_135624_010 Hb_062244_010 Hb_062244_010 Hb_004413_030--Hb_062244_010 Hb_005532_010 Hb_005532_010 Hb_004413_030--Hb_005532_010 Hb_001009_130 Hb_001009_130 Hb_004413_030--Hb_001009_130 Hb_003446_040 Hb_003446_040 Hb_004413_030--Hb_003446_040 Hb_004413_030--Hb_001277_310 Hb_000144_140 Hb_000144_140 Hb_001277_310--Hb_000144_140 Hb_001277_310--Hb_003446_040 Hb_001277_310--Hb_001009_130 Hb_001277_310--Hb_135624_010 Hb_135624_010--Hb_062244_010 Hb_135624_010--Hb_001009_130 Hb_135624_010--Hb_005532_010 Hb_135624_010--Hb_000144_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0724631 0 0 0 0 0.208191
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.176599 0.0432331 0

CAGE analysis