Hb_006351_120

Information

Type -
Description -
Location Contig6351: 150394-159048
Sequence    

Annotation

kegg
ID cic:CICLE_v10030803mg
description hypothetical protein
nr
ID XP_006435574.1
description hypothetical protein CICLE_v10030803mg [Citrus clementina]
swissprot
ID Q9FI98
description UDP-glycosyltransferase 76C4 OS=Arabidopsis thaliana GN=UGT76C4 PE=2 SV=1
trembl
ID V4V9F4
description Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030803mg PE=4 SV=1
Gene Ontology
ID GO:0016758
description udp-glycosyltransferase superfamily

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51938: 150962-151222 , PASA_asmbl_51939: 155351-155929
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006351_120 0.0 - - hypothetical protein CICLE_v10030803mg [Citrus clementina]
2 Hb_000856_210 0.0891851977 - - nitrate transporter, putative [Ricinus communis]
3 Hb_000207_240 0.0902669486 - - hypothetical protein RCOM_0686540 [Ricinus communis]
4 Hb_019925_020 0.1064547323 - - electron carrier, putative [Ricinus communis]
5 Hb_094437_020 0.1232702049 - - Xylem serine proteinase 1 precursor, putative [Ricinus communis]
6 Hb_125181_010 0.1260979556 - - PREDICTED: uncharacterized protein LOC104115096 [Nicotiana tomentosiformis]
7 Hb_001396_130 0.1302685696 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002876_280 0.1357452642 - - hypothetical protein RCOM_0686540 [Ricinus communis]
9 Hb_037519_010 0.1361404651 - - PREDICTED: auxin-induced in root cultures protein 12-like [Jatropha curcas]
10 Hb_145080_010 0.1368339777 - - PREDICTED: uncharacterized protein LOC105643750 [Jatropha curcas]
11 Hb_112791_030 0.1391755263 - - Uncharacterized protein TCM_027940 [Theobroma cacao]
12 Hb_003714_030 0.1396500696 - - PREDICTED: receptor-like protein kinase FERONIA [Jatropha curcas]
13 Hb_001097_140 0.1401900889 - - conserved hypothetical protein [Ricinus communis]
14 Hb_007295_020 0.1452804644 - - Uncharacterized protein TCM_034658 [Theobroma cacao]
15 Hb_011358_010 0.1455079361 - - -
16 Hb_006916_140 0.1463424968 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Jatropha curcas]
17 Hb_005018_030 0.1508423028 - - hypothetical protein CICLE_v10019811mg [Citrus clementina]
18 Hb_016734_040 0.1531155783 - - abhydrolase domain containing, putative [Ricinus communis]
19 Hb_016564_050 0.1552085735 - - -
20 Hb_011432_010 0.1574337912 - - hypothetical protein JCGZ_23781 [Jatropha curcas]

Gene co-expression network

sample Hb_006351_120 Hb_006351_120 Hb_000856_210 Hb_000856_210 Hb_006351_120--Hb_000856_210 Hb_000207_240 Hb_000207_240 Hb_006351_120--Hb_000207_240 Hb_019925_020 Hb_019925_020 Hb_006351_120--Hb_019925_020 Hb_094437_020 Hb_094437_020 Hb_006351_120--Hb_094437_020 Hb_125181_010 Hb_125181_010 Hb_006351_120--Hb_125181_010 Hb_001396_130 Hb_001396_130 Hb_006351_120--Hb_001396_130 Hb_000856_210--Hb_019925_020 Hb_000856_210--Hb_000207_240 Hb_002876_280 Hb_002876_280 Hb_000856_210--Hb_002876_280 Hb_003858_060 Hb_003858_060 Hb_000856_210--Hb_003858_060 Hb_000856_210--Hb_094437_020 Hb_001097_140 Hb_001097_140 Hb_000207_240--Hb_001097_140 Hb_003714_030 Hb_003714_030 Hb_000207_240--Hb_003714_030 Hb_000207_240--Hb_019925_020 Hb_000207_240--Hb_001396_130 Hb_000000_290 Hb_000000_290 Hb_019925_020--Hb_000000_290 Hb_005018_030 Hb_005018_030 Hb_019925_020--Hb_005018_030 Hb_000023_180 Hb_000023_180 Hb_019925_020--Hb_000023_180 Hb_094437_020--Hb_003858_060 Hb_094437_020--Hb_000207_240 Hb_006916_140 Hb_006916_140 Hb_094437_020--Hb_006916_140 Hb_000392_490 Hb_000392_490 Hb_094437_020--Hb_000392_490 Hb_004204_220 Hb_004204_220 Hb_094437_020--Hb_004204_220 Hb_001221_250 Hb_001221_250 Hb_125181_010--Hb_001221_250 Hb_019925_010 Hb_019925_010 Hb_125181_010--Hb_019925_010 Hb_000193_090 Hb_000193_090 Hb_125181_010--Hb_000193_090 Hb_007590_030 Hb_007590_030 Hb_125181_010--Hb_007590_030 Hb_044380_010 Hb_044380_010 Hb_125181_010--Hb_044380_010 Hb_186765_010 Hb_186765_010 Hb_001396_130--Hb_186765_010 Hb_001976_100 Hb_001976_100 Hb_001396_130--Hb_001976_100 Hb_000377_130 Hb_000377_130 Hb_001396_130--Hb_000377_130 Hb_006755_030 Hb_006755_030 Hb_001396_130--Hb_006755_030 Hb_001396_130--Hb_044380_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00503765 1.84989 0.164071 4.60163 0 0.0177974
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0342411 0.062875 0 1.03549 6.90535

CAGE analysis