Hb_006356_030

Information

Type -
Description -
Location Contig6356: 15678-19726
Sequence    

Annotation

kegg
ID vvi:100243949
description uncharacterized LOC100243949
nr
ID XP_012068364.1
description PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
swissprot
ID Q9LP24
description Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1
trembl
ID A0A067KYY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15779 PE=4 SV=1
Gene Ontology
ID GO:0016020
description probable leucine-rich repeat receptor-like protein kinase at1g35710

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006356_030 0.0 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
2 Hb_000923_110 0.0030705616 - - PREDICTED: uncharacterized protein LOC102624489 [Citrus sinensis]
3 Hb_054127_020 0.097169836 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
4 Hb_010367_010 0.1009697467 - - -
5 Hb_003868_010 0.101320176 - - -
6 Hb_000025_460 0.1018490193 - - PREDICTED: uncharacterized protein LOC104895905 [Beta vulgaris subsp. vulgaris]
7 Hb_120076_010 0.1021173658 - - PREDICTED: uncharacterized protein LOC104783951 [Camelina sativa]
8 Hb_000466_180 0.1021259217 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_007167_100 0.1021493837 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
10 Hb_007251_010 0.1021866104 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
11 Hb_010132_070 0.1022063996 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_034066_010 0.1022110332 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
13 Hb_144850_070 0.1022185031 - - OSJNBa0032N05.11 [Oryza sativa Japonica Group]
14 Hb_012535_030 0.1022198659 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
15 Hb_114981_010 0.1022308631 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
16 Hb_004667_010 0.1022374347 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
17 Hb_007719_020 0.1022420219 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
18 Hb_010907_010 0.102254665 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
19 Hb_147844_010 0.1022705963 - - putative 60S ribosomal protein L37 [Aegilops tauschii]
20 Hb_007014_020 0.1022733383 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]

Gene co-expression network

sample Hb_006356_030 Hb_006356_030 Hb_000923_110 Hb_000923_110 Hb_006356_030--Hb_000923_110 Hb_054127_020 Hb_054127_020 Hb_006356_030--Hb_054127_020 Hb_010367_010 Hb_010367_010 Hb_006356_030--Hb_010367_010 Hb_003868_010 Hb_003868_010 Hb_006356_030--Hb_003868_010 Hb_000025_460 Hb_000025_460 Hb_006356_030--Hb_000025_460 Hb_120076_010 Hb_120076_010 Hb_006356_030--Hb_120076_010 Hb_000923_110--Hb_054127_020 Hb_000923_110--Hb_010367_010 Hb_000923_110--Hb_003868_010 Hb_000466_180 Hb_000466_180 Hb_000923_110--Hb_000466_180 Hb_007167_100 Hb_007167_100 Hb_000923_110--Hb_007167_100 Hb_000405_010 Hb_000405_010 Hb_054127_020--Hb_000405_010 Hb_004445_030 Hb_004445_030 Hb_054127_020--Hb_004445_030 Hb_002576_010 Hb_002576_010 Hb_054127_020--Hb_002576_010 Hb_047923_030 Hb_047923_030 Hb_054127_020--Hb_047923_030 Hb_010367_010--Hb_003868_010 Hb_010367_010--Hb_000025_460 Hb_010367_010--Hb_120076_010 Hb_000465_010 Hb_000465_010 Hb_010367_010--Hb_000465_010 Hb_010367_010--Hb_000466_180 Hb_010367_010--Hb_007167_100 Hb_003868_010--Hb_000025_460 Hb_003868_010--Hb_120076_010 Hb_003868_010--Hb_000465_010 Hb_003868_010--Hb_000466_180 Hb_003868_010--Hb_007167_100 Hb_000025_460--Hb_120076_010 Hb_000025_460--Hb_000465_010 Hb_154188_010 Hb_154188_010 Hb_000025_460--Hb_154188_010 Hb_012781_030 Hb_012781_030 Hb_000025_460--Hb_012781_030 Hb_120076_010--Hb_000465_010 Hb_120076_010--Hb_154188_010 Hb_120076_010--Hb_012781_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00470445 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0323487 0.196242

CAGE analysis