Hb_006422_020

Information

Type -
Description -
Location Contig6422: 17540-18187
Sequence    

Annotation

kegg
ID pop:POPTR_0021s00760g
description hypothetical protein
nr
ID XP_012091349.1
description PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JAH7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21223 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006422_020 0.0 - - PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
2 Hb_000997_100 0.1208779725 - - PREDICTED: uncharacterized protein LOC105632094 isoform X2 [Jatropha curcas]
3 Hb_000031_230 0.1482023002 - - PREDICTED: probable cyclic nucleotide-gated ion channel 14 isoform X1 [Jatropha curcas]
4 Hb_000815_230 0.149155495 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000042_060 0.1500328366 - - PREDICTED: uncharacterized protein LOC105632794 [Jatropha curcas]
6 Hb_000964_170 0.1520620937 - - Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus communis]
7 Hb_003849_160 0.1544634212 - - PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Jatropha curcas]
8 Hb_003053_050 0.1563667546 - - PREDICTED: putative phospholipid-transporting ATPase 8 [Jatropha curcas]
9 Hb_167775_010 0.1592213897 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
10 Hb_011828_010 0.1626039287 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
11 Hb_002053_050 0.1630745817 - - Kinesin heavy chain, putative [Ricinus communis]
12 Hb_000071_160 0.1646475495 - - PREDICTED: protein IQ-DOMAIN 14 [Jatropha curcas]
13 Hb_024698_010 0.1648917457 - - PREDICTED: RING-H2 finger protein ATL46 [Jatropha curcas]
14 Hb_000529_130 0.1661504679 - - hypothetical protein POPTR_0007s14320g [Populus trichocarpa]
15 Hb_001396_240 0.1663605088 transcription factor TF Family: Orphans PREDICTED: histidine kinase 3 isoform X1 [Jatropha curcas]
16 Hb_004994_350 0.1685794456 - - PREDICTED: UPF0187 protein At3g61320, chloroplastic [Jatropha curcas]
17 Hb_002097_100 0.1690166398 - - protein with unknown function [Ricinus communis]
18 Hb_000056_010 0.1703045441 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
19 Hb_000589_420 0.1712220271 - - PREDICTED: uncharacterized protein LOC105647273 [Jatropha curcas]
20 Hb_006916_030 0.174033703 - - PREDICTED: uncharacterized protein LOC105646760 [Jatropha curcas]

Gene co-expression network

sample Hb_006422_020 Hb_006422_020 Hb_000997_100 Hb_000997_100 Hb_006422_020--Hb_000997_100 Hb_000031_230 Hb_000031_230 Hb_006422_020--Hb_000031_230 Hb_000815_230 Hb_000815_230 Hb_006422_020--Hb_000815_230 Hb_000042_060 Hb_000042_060 Hb_006422_020--Hb_000042_060 Hb_000964_170 Hb_000964_170 Hb_006422_020--Hb_000964_170 Hb_003849_160 Hb_003849_160 Hb_006422_020--Hb_003849_160 Hb_000997_100--Hb_000031_230 Hb_000529_130 Hb_000529_130 Hb_000997_100--Hb_000529_130 Hb_003734_080 Hb_003734_080 Hb_000997_100--Hb_003734_080 Hb_000997_100--Hb_003849_160 Hb_004994_350 Hb_004994_350 Hb_000997_100--Hb_004994_350 Hb_003053_050 Hb_003053_050 Hb_000031_230--Hb_003053_050 Hb_007192_090 Hb_007192_090 Hb_000031_230--Hb_007192_090 Hb_008092_060 Hb_008092_060 Hb_000031_230--Hb_008092_060 Hb_001250_020 Hb_001250_020 Hb_000031_230--Hb_001250_020 Hb_001408_030 Hb_001408_030 Hb_000031_230--Hb_001408_030 Hb_000505_080 Hb_000505_080 Hb_000815_230--Hb_000505_080 Hb_002053_050 Hb_002053_050 Hb_000815_230--Hb_002053_050 Hb_003682_070 Hb_003682_070 Hb_000815_230--Hb_003682_070 Hb_000000_310 Hb_000000_310 Hb_000815_230--Hb_000000_310 Hb_010344_030 Hb_010344_030 Hb_000815_230--Hb_010344_030 Hb_004735_020 Hb_004735_020 Hb_000815_230--Hb_004735_020 Hb_167775_010 Hb_167775_010 Hb_000042_060--Hb_167775_010 Hb_002374_550 Hb_002374_550 Hb_000042_060--Hb_002374_550 Hb_001269_520 Hb_001269_520 Hb_000042_060--Hb_001269_520 Hb_000251_050 Hb_000251_050 Hb_000042_060--Hb_000251_050 Hb_000071_160 Hb_000071_160 Hb_000042_060--Hb_000071_160 Hb_002320_090 Hb_002320_090 Hb_000964_170--Hb_002320_090 Hb_006916_030 Hb_006916_030 Hb_000964_170--Hb_006916_030 Hb_000445_370 Hb_000445_370 Hb_000964_170--Hb_000445_370 Hb_001411_050 Hb_001411_050 Hb_000964_170--Hb_001411_050 Hb_001140_180 Hb_001140_180 Hb_000964_170--Hb_001140_180 Hb_000270_710 Hb_000270_710 Hb_000964_170--Hb_000270_710 Hb_029552_020 Hb_029552_020 Hb_003849_160--Hb_029552_020 Hb_003849_160--Hb_000529_130 Hb_001999_320 Hb_001999_320 Hb_003849_160--Hb_001999_320 Hb_002675_080 Hb_002675_080 Hb_003849_160--Hb_002675_080 Hb_009078_020 Hb_009078_020 Hb_003849_160--Hb_009078_020 Hb_000968_060 Hb_000968_060 Hb_003849_160--Hb_000968_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.53557 10.1627 9.80307 15.5311 3.64318 7.47083
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.180466 0.780185 1.37914 2.78048 19.162

CAGE analysis