Hb_006453_010

Information

Type -
Description -
Location Contig6453: 14716-15168
Sequence    

Annotation

kegg
ID rcu:RCOM_1672930
description glutaredoxin, grx, putative
nr
ID XP_012091677.1
description PREDICTED: glutaredoxin-C9 [Jatropha curcas]
swissprot
ID Q9SGP6
description Glutaredoxin-C9 OS=Arabidopsis thaliana GN=GRXC9 PE=1 SV=1
trembl
ID A0A067JE28
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21489 PE=4 SV=1
Gene Ontology
ID GO:0005623
description glutaredoxin-like family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006453_010 0.0 - - PREDICTED: glutaredoxin-C9 [Jatropha curcas]
2 Hb_006573_300 0.1605727114 - - ATP binding protein, putative [Ricinus communis]
3 Hb_000853_060 0.1841138389 - - PREDICTED: myelin transcription factor 1-like isoform X1 [Jatropha curcas]
4 Hb_116349_040 0.1916876277 transcription factor TF Family: Orphans PREDICTED: two-component response regulator ARR5 [Jatropha curcas]
5 Hb_001114_070 0.1931001468 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g58400 [Jatropha curcas]
6 Hb_000165_210 0.1964635321 - - PREDICTED: trihelix transcription factor ASIL2 isoform X2 [Jatropha curcas]
7 Hb_000983_080 0.199783229 transcription factor TF Family: bZIP PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]
8 Hb_001486_030 0.2051961374 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002686_120 0.205414826 - - short-chain type dehydrogenase, putative [Ricinus communis]
10 Hb_027380_200 0.2057620477 transcription factor TF Family: ARF PREDICTED: auxin response factor 6 isoform X2 [Jatropha curcas]
11 Hb_028811_010 0.2058143163 - - PREDICTED: uncharacterized protein LOC105650178 isoform X1 [Jatropha curcas]
12 Hb_000414_110 0.2079436266 - - PREDICTED: MATE efflux family protein 5 isoform X1 [Populus euphratica]
13 Hb_000011_420 0.2092995699 - - PREDICTED: GDSL esterase/lipase At1g29660-like [Citrus sinensis]
14 Hb_000318_200 0.2153164129 - - PREDICTED: hyoscyamine 6-dioxygenase-like [Jatropha curcas]
15 Hb_001621_010 0.2167463012 - - PREDICTED: uncharacterized protein LOC102615432 [Citrus sinensis]
16 Hb_012317_020 0.2232038421 - - PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
17 Hb_000417_320 0.2239254919 - - hypothetical protein CICLE_v10000333mg [Citrus clementina]
18 Hb_009193_100 0.2242812943 - - hypothetical protein JCGZ_15709 [Jatropha curcas]
19 Hb_002291_010 0.2251408041 - - ring finger protein, putative [Ricinus communis]
20 Hb_031862_040 0.2282213993 - - purine transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_006453_010 Hb_006453_010 Hb_006573_300 Hb_006573_300 Hb_006453_010--Hb_006573_300 Hb_000853_060 Hb_000853_060 Hb_006453_010--Hb_000853_060 Hb_116349_040 Hb_116349_040 Hb_006453_010--Hb_116349_040 Hb_001114_070 Hb_001114_070 Hb_006453_010--Hb_001114_070 Hb_000165_210 Hb_000165_210 Hb_006453_010--Hb_000165_210 Hb_000983_080 Hb_000983_080 Hb_006453_010--Hb_000983_080 Hb_006573_300--Hb_001114_070 Hb_006573_300--Hb_000853_060 Hb_007676_020 Hb_007676_020 Hb_006573_300--Hb_007676_020 Hb_004195_090 Hb_004195_090 Hb_006573_300--Hb_004195_090 Hb_020805_170 Hb_020805_170 Hb_006573_300--Hb_020805_170 Hb_000853_060--Hb_000165_210 Hb_007919_040 Hb_007919_040 Hb_000853_060--Hb_007919_040 Hb_003120_040 Hb_003120_040 Hb_000853_060--Hb_003120_040 Hb_000853_060--Hb_001114_070 Hb_029584_090 Hb_029584_090 Hb_000853_060--Hb_029584_090 Hb_008066_070 Hb_008066_070 Hb_116349_040--Hb_008066_070 Hb_007576_200 Hb_007576_200 Hb_116349_040--Hb_007576_200 Hb_000023_250 Hb_000023_250 Hb_116349_040--Hb_000023_250 Hb_006446_010 Hb_006446_010 Hb_116349_040--Hb_006446_010 Hb_001053_090 Hb_001053_090 Hb_116349_040--Hb_001053_090 Hb_001114_070--Hb_007676_020 Hb_001114_070--Hb_020805_170 Hb_031862_040 Hb_031862_040 Hb_001114_070--Hb_031862_040 Hb_012098_170 Hb_012098_170 Hb_001114_070--Hb_012098_170 Hb_000120_390 Hb_000120_390 Hb_000165_210--Hb_000120_390 Hb_000414_110 Hb_000414_110 Hb_000165_210--Hb_000414_110 Hb_001206_090 Hb_001206_090 Hb_000165_210--Hb_001206_090 Hb_002304_140 Hb_002304_140 Hb_000165_210--Hb_002304_140 Hb_000879_190 Hb_000879_190 Hb_000165_210--Hb_000879_190 Hb_009193_100 Hb_009193_100 Hb_000983_080--Hb_009193_100 Hb_012317_020 Hb_012317_020 Hb_000983_080--Hb_012317_020 Hb_000699_230 Hb_000699_230 Hb_000983_080--Hb_000699_230 Hb_128589_010 Hb_128589_010 Hb_000983_080--Hb_128589_010 Hb_011872_020 Hb_011872_020 Hb_000983_080--Hb_011872_020 Hb_000059_300 Hb_000059_300 Hb_000983_080--Hb_000059_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.34694 28.7325 5.97838 11.1804 0.199626 0.182554
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.529 8.22501 18.3762 46.3432 8.18704

CAGE analysis