Hb_006483_090

Information

Type -
Description -
Location Contig6483: 86865-91243
Sequence    

Annotation

kegg
ID rcu:RCOM_1408500
description triacylglycerol lipase, putative
nr
ID XP_012079575.1
description PREDICTED: uncharacterized protein LOC105639979 [Jatropha curcas]
swissprot
ID P61872
description Lipase OS=Rhizopus oryzae PE=1 SV=1
trembl
ID A0A067KJC7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12400 PE=4 SV=1
Gene Ontology
ID GO:0016020
description alpha beta-hydrolases superfamily

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52448: 86985-89361 , PASA_asmbl_52449: 89543-91158 , PASA_asmbl_52450: 89527-89777
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006483_090 0.0 - - PREDICTED: uncharacterized protein LOC105639979 [Jatropha curcas]
2 Hb_000477_110 0.0758489064 transcription factor TF Family: GRAS PREDICTED: DELLA protein SLR1-like [Jatropha curcas]
3 Hb_002849_180 0.0988684891 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
4 Hb_006269_010 0.1016549195 - - hypothetical protein JCGZ_21552 [Jatropha curcas]
5 Hb_001153_090 0.1032179003 - - PREDICTED: protein FAM63A [Jatropha curcas]
6 Hb_000007_440 0.1038897727 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
7 Hb_007483_080 0.1044997021 - - hypothetical protein RCOM_0634810 [Ricinus communis]
8 Hb_001160_020 0.1137902221 transcription factor TF Family: NF-YA Nuclear transcription factor Y subunit A-3, putative [Ricinus communis]
9 Hb_003387_080 0.1170157724 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
10 Hb_000500_230 0.1173518365 - - hypothetical protein RCOM_0634810 [Ricinus communis]
11 Hb_000260_480 0.1202059305 transcription factor TF Family: GRAS PREDICTED: protein SCARECROW [Jatropha curcas]
12 Hb_001123_170 0.1202393082 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001538_050 0.1233497924 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
14 Hb_000318_050 0.1238780224 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Jatropha curcas]
15 Hb_000369_070 0.1255119554 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
16 Hb_002010_100 0.1261435211 - - PREDICTED: uncharacterized protein LOC105633355 [Jatropha curcas]
17 Hb_006970_170 0.1271286278 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
18 Hb_007747_100 0.1273802676 - - PREDICTED: probable F-box protein At1g60180 [Jatropha curcas]
19 Hb_001956_080 0.1291775013 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 14 [Jatropha curcas]
20 Hb_004837_110 0.1297860014 - - PREDICTED: MATE efflux family protein 1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_006483_090 Hb_006483_090 Hb_000477_110 Hb_000477_110 Hb_006483_090--Hb_000477_110 Hb_002849_180 Hb_002849_180 Hb_006483_090--Hb_002849_180 Hb_006269_010 Hb_006269_010 Hb_006483_090--Hb_006269_010 Hb_001153_090 Hb_001153_090 Hb_006483_090--Hb_001153_090 Hb_000007_440 Hb_000007_440 Hb_006483_090--Hb_000007_440 Hb_007483_080 Hb_007483_080 Hb_006483_090--Hb_007483_080 Hb_000472_020 Hb_000472_020 Hb_000477_110--Hb_000472_020 Hb_000477_110--Hb_006269_010 Hb_001956_080 Hb_001956_080 Hb_000477_110--Hb_001956_080 Hb_000477_110--Hb_001153_090 Hb_000613_250 Hb_000613_250 Hb_000477_110--Hb_000613_250 Hb_002849_180--Hb_000007_440 Hb_000320_450 Hb_000320_450 Hb_002849_180--Hb_000320_450 Hb_002849_180--Hb_007483_080 Hb_002849_180--Hb_000613_250 Hb_012308_050 Hb_012308_050 Hb_002849_180--Hb_012308_050 Hb_006269_010--Hb_001153_090 Hb_001174_030 Hb_001174_030 Hb_006269_010--Hb_001174_030 Hb_000085_220 Hb_000085_220 Hb_006269_010--Hb_000085_220 Hb_014361_020 Hb_014361_020 Hb_006269_010--Hb_014361_020 Hb_004166_020 Hb_004166_020 Hb_006269_010--Hb_004166_020 Hb_002849_120 Hb_002849_120 Hb_001153_090--Hb_002849_120 Hb_007747_100 Hb_007747_100 Hb_001153_090--Hb_007747_100 Hb_023344_130 Hb_023344_130 Hb_001153_090--Hb_023344_130 Hb_001160_020 Hb_001160_020 Hb_001153_090--Hb_001160_020 Hb_003077_140 Hb_003077_140 Hb_001153_090--Hb_003077_140 Hb_000007_440--Hb_007483_080 Hb_002010_100 Hb_002010_100 Hb_000007_440--Hb_002010_100 Hb_001158_120 Hb_001158_120 Hb_000007_440--Hb_001158_120 Hb_006970_170 Hb_006970_170 Hb_000007_440--Hb_006970_170 Hb_007483_080--Hb_002010_100 Hb_002361_010 Hb_002361_010 Hb_007483_080--Hb_002361_010 Hb_007483_080--Hb_001158_120 Hb_000500_230 Hb_000500_230 Hb_007483_080--Hb_000500_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0753677 5.22792 3.70385 3.13404 0.0713963 0.194241
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.34147 3.21035

CAGE analysis