Hb_006569_110

Information

Type -
Description -
Location Contig6569: 134817-141929
Sequence    

Annotation

kegg
ID rcu:RCOM_0229180
description hypothetical protein
nr
ID XP_002529583.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q67IX6
description Protein disulfide isomerase-like 1-4 OS=Oryza sativa subsp. japonica GN=PDIL1-4 PE=2 SV=1
trembl
ID B9SUB4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0229180 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006569_110 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_006938_010 0.0521834806 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
3 Hb_007894_260 0.0736011278 - - receptor protein kinase, putative [Ricinus communis]
4 Hb_003060_080 0.0829513386 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
5 Hb_000254_150 0.0848247236 - - PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
6 Hb_002928_220 0.1092676076 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
7 Hb_006970_100 0.116706767 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_018212_020 0.116759251 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
9 Hb_000381_030 0.1197306705 - - PREDICTED: aquaporin SIP1-1-like [Jatropha curcas]
10 Hb_001331_040 0.1210373069 - - PREDICTED: cationic peroxidase 1-like [Jatropha curcas]
11 Hb_000920_360 0.1223807588 - - PREDICTED: (R,S)-reticuline 7-O-methyltransferase-like [Jatropha curcas]
12 Hb_002542_090 0.1291944709 - - Potassium transporter, putative [Ricinus communis]
13 Hb_009627_040 0.1293018806 - - Lipase class 3-related protein, putative [Theobroma cacao]
14 Hb_132515_010 0.1307772238 - - phosphoprotein phosphatase, putative [Ricinus communis]
15 Hb_029508_030 0.1313309707 transcription factor TF Family: C2H2 hypothetical protein POPTR_0002s04880g [Populus trichocarpa]
16 Hb_004884_200 0.133483559 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
17 Hb_000010_200 0.1391291027 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
18 Hb_005116_010 0.1392189611 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
19 Hb_000286_190 0.1414188018 - - PREDICTED: probable receptor-like protein kinase At1g11050 [Jatropha curcas]
20 Hb_008692_010 0.1420292747 - - putative polyol transported protein 2 [Hevea brasiliensis]

Gene co-expression network

sample Hb_006569_110 Hb_006569_110 Hb_006938_010 Hb_006938_010 Hb_006569_110--Hb_006938_010 Hb_007894_260 Hb_007894_260 Hb_006569_110--Hb_007894_260 Hb_003060_080 Hb_003060_080 Hb_006569_110--Hb_003060_080 Hb_000254_150 Hb_000254_150 Hb_006569_110--Hb_000254_150 Hb_002928_220 Hb_002928_220 Hb_006569_110--Hb_002928_220 Hb_006970_100 Hb_006970_100 Hb_006569_110--Hb_006970_100 Hb_001331_040 Hb_001331_040 Hb_006938_010--Hb_001331_040 Hb_000381_030 Hb_000381_030 Hb_006938_010--Hb_000381_030 Hb_006938_010--Hb_007894_260 Hb_006949_030 Hb_006949_030 Hb_006938_010--Hb_006949_030 Hb_002542_090 Hb_002542_090 Hb_006938_010--Hb_002542_090 Hb_007894_260--Hb_003060_080 Hb_000010_200 Hb_000010_200 Hb_007894_260--Hb_000010_200 Hb_007894_260--Hb_000381_030 Hb_000920_360 Hb_000920_360 Hb_007894_260--Hb_000920_360 Hb_003060_080--Hb_006970_100 Hb_006651_010 Hb_006651_010 Hb_003060_080--Hb_006651_010 Hb_025526_010 Hb_025526_010 Hb_003060_080--Hb_025526_010 Hb_003060_080--Hb_006938_010 Hb_018212_020 Hb_018212_020 Hb_000254_150--Hb_018212_020 Hb_010813_030 Hb_010813_030 Hb_000254_150--Hb_010813_030 Hb_005618_110 Hb_005618_110 Hb_000254_150--Hb_005618_110 Hb_001675_130 Hb_001675_130 Hb_000254_150--Hb_001675_130 Hb_000254_150--Hb_006938_010 Hb_002928_220--Hb_006970_100 Hb_000149_120 Hb_000149_120 Hb_002928_220--Hb_000149_120 Hb_009486_100 Hb_009486_100 Hb_002928_220--Hb_009486_100 Hb_002928_220--Hb_002542_090 Hb_002928_220--Hb_006938_010 Hb_006970_100--Hb_006651_010 Hb_007382_070 Hb_007382_070 Hb_006970_100--Hb_007382_070 Hb_033622_020 Hb_033622_020 Hb_006970_100--Hb_033622_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0705101 0.0157325 0.013769 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.171286 0.0464588

CAGE analysis