Hb_006570_130

Information

Type -
Description -
Location Contig6570: 76773-78102
Sequence    

Annotation

kegg
ID rcu:RCOM_1598030
description hypothetical protein
nr
ID XP_002510539.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9R896
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1598030 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006570_130 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_028707_060 0.0516328786 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC101308915 [Fragaria vesca subsp. vesca]
3 Hb_038601_010 0.0810558446 - - PREDICTED: uncharacterized protein LOC102606280 [Solanum tuberosum]
4 Hb_002435_070 0.1073704189 - - hypothetical protein JCGZ_05738 [Jatropha curcas]
5 Hb_004725_040 0.1075526734 - - -
6 Hb_000380_030 0.1345754755 - - Kiwellin, putative [Ricinus communis]
7 Hb_000787_120 0.1345935315 - - 2S sulfur-rich seed storage protein precursor large subunit, putative [Ricinus communis]
8 Hb_003633_110 0.1346177576 - - hypothetical protein PRUPE_ppa019329mg [Prunus persica]
9 Hb_001274_060 0.1346640741 - - PREDICTED: uncharacterized protein LOC105802656 [Gossypium raimondii]
10 Hb_001459_070 0.1347751546 - - -
11 Hb_107725_010 0.1351582437 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
12 Hb_055235_010 0.1388713233 - - UDP-glucosyltransferase, putative [Ricinus communis]
13 Hb_005743_020 0.1393443241 - - -
14 Hb_105632_010 0.1393490323 - - -
15 Hb_000495_090 0.1410189554 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
16 Hb_000073_070 0.1413414863 - - -
17 Hb_002893_140 0.1510923079 - - Glycine-rich cell wall structural protein precursor, putative [Ricinus communis]
18 Hb_003813_150 0.1530478344 - - hypothetical protein POPTR_0004s09690g [Populus trichocarpa]
19 Hb_034468_010 0.1542823396 - - hypothetical protein EUGRSUZ_A02374 [Eucalyptus grandis]
20 Hb_000160_340 0.1588082886 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_006570_130 Hb_006570_130 Hb_028707_060 Hb_028707_060 Hb_006570_130--Hb_028707_060 Hb_038601_010 Hb_038601_010 Hb_006570_130--Hb_038601_010 Hb_002435_070 Hb_002435_070 Hb_006570_130--Hb_002435_070 Hb_004725_040 Hb_004725_040 Hb_006570_130--Hb_004725_040 Hb_000380_030 Hb_000380_030 Hb_006570_130--Hb_000380_030 Hb_000787_120 Hb_000787_120 Hb_006570_130--Hb_000787_120 Hb_055235_010 Hb_055235_010 Hb_028707_060--Hb_055235_010 Hb_107725_010 Hb_107725_010 Hb_028707_060--Hb_107725_010 Hb_001459_070 Hb_001459_070 Hb_028707_060--Hb_001459_070 Hb_003633_110 Hb_003633_110 Hb_028707_060--Hb_003633_110 Hb_028707_060--Hb_000787_120 Hb_038601_010--Hb_002435_070 Hb_038601_010--Hb_004725_040 Hb_038601_010--Hb_028707_060 Hb_008764_010 Hb_008764_010 Hb_038601_010--Hb_008764_010 Hb_154114_020 Hb_154114_020 Hb_038601_010--Hb_154114_020 Hb_002435_070--Hb_004725_040 Hb_002435_070--Hb_008764_010 Hb_011671_200 Hb_011671_200 Hb_002435_070--Hb_011671_200 Hb_000604_080 Hb_000604_080 Hb_002435_070--Hb_000604_080 Hb_004725_040--Hb_011671_200 Hb_004725_040--Hb_008764_010 Hb_000976_420 Hb_000976_420 Hb_004725_040--Hb_000976_420 Hb_000380_030--Hb_000787_120 Hb_000380_030--Hb_003633_110 Hb_001274_060 Hb_001274_060 Hb_000380_030--Hb_001274_060 Hb_000380_030--Hb_001459_070 Hb_000380_030--Hb_107725_010 Hb_000380_030--Hb_055235_010 Hb_000787_120--Hb_003633_110 Hb_000787_120--Hb_001459_070 Hb_000787_120--Hb_001274_060 Hb_000787_120--Hb_107725_010 Hb_000787_120--Hb_055235_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.220484 0.50112 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0267551 0

CAGE analysis