Hb_006573_240

Information

Type -
Description -
Location Contig6573: 161882-163394
Sequence    

Annotation

kegg
ID pop:POPTR_0012s00960g
description hypothetical protein
nr
ID XP_012090162.1
description PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
swissprot
ID Q4R1I9
description Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hybrid cultivar GN=RhGT1 PE=2 SV=1
trembl
ID A0A067JQG0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26036 PE=3 SV=1
Gene Ontology
ID GO:0016757
description anthocyanidin -o-glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52830: 162385-162585
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006573_240 0.0 - - PREDICTED: anthocyanidin 5,3-O-glucosyltransferase-like [Jatropha curcas]
2 Hb_003033_020 0.0434890719 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Jatropha curcas]
3 Hb_003787_030 0.0500712537 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000928_260 0.0520764195 - - hypothetical protein POPTR_0019s06080g [Populus trichocarpa]
5 Hb_002301_070 0.0594579635 - - PREDICTED: triose phosphate/phosphate translocator TPT, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_002329_050 0.0627702371 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000307_100 0.0705340063 - - Plastocyanin A, chloroplast precursor, putative [Ricinus communis]
8 Hb_006291_050 0.0745301702 - - PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial isoform X1 [Jatropha curcas]
9 Hb_010697_020 0.0752018481 - - conserved hypothetical protein [Ricinus communis]
10 Hb_131466_010 0.0763103014 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
11 Hb_000268_050 0.077547387 - - PREDICTED: tetrapyrrole-binding protein, chloroplastic [Jatropha curcas]
12 Hb_002042_210 0.0815723033 - - PREDICTED: UPF0603 protein At1g54780, chloroplastic [Jatropha curcas]
13 Hb_001191_060 0.081734021 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Populus euphratica]
14 Hb_011537_130 0.0857525764 - - unnamed protein product [Vitis vinifera]
15 Hb_000883_080 0.0869127587 - - ankyrin repeat-containing protein, putative [Ricinus communis]
16 Hb_003186_030 0.087123017 transcription factor TF Family: MYB hypothetical protein POPTR_0012s05720g [Populus trichocarpa]
17 Hb_029991_010 0.0872264671 - - hypothetical protein PRUPE_ppa001615mg [Prunus persica]
18 Hb_005675_030 0.0880310842 - - PREDICTED: 3-ketoacyl-CoA synthase 6 [Jatropha curcas]
19 Hb_000815_120 0.0897953378 - - calcium ion binding protein, putative [Ricinus communis]
20 Hb_000046_400 0.090667741 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_006573_240 Hb_006573_240 Hb_003033_020 Hb_003033_020 Hb_006573_240--Hb_003033_020 Hb_003787_030 Hb_003787_030 Hb_006573_240--Hb_003787_030 Hb_000928_260 Hb_000928_260 Hb_006573_240--Hb_000928_260 Hb_002301_070 Hb_002301_070 Hb_006573_240--Hb_002301_070 Hb_002329_050 Hb_002329_050 Hb_006573_240--Hb_002329_050 Hb_000307_100 Hb_000307_100 Hb_006573_240--Hb_000307_100 Hb_001191_060 Hb_001191_060 Hb_003033_020--Hb_001191_060 Hb_003186_030 Hb_003186_030 Hb_003033_020--Hb_003186_030 Hb_010697_020 Hb_010697_020 Hb_003033_020--Hb_010697_020 Hb_003033_020--Hb_003787_030 Hb_003033_020--Hb_000307_100 Hb_003787_030--Hb_002301_070 Hb_003787_030--Hb_000928_260 Hb_003787_030--Hb_010697_020 Hb_000815_120 Hb_000815_120 Hb_003787_030--Hb_000815_120 Hb_004143_080 Hb_004143_080 Hb_003787_030--Hb_004143_080 Hb_000928_260--Hb_002301_070 Hb_000928_260--Hb_010697_020 Hb_000883_080 Hb_000883_080 Hb_000928_260--Hb_000883_080 Hb_000928_260--Hb_004143_080 Hb_002301_070--Hb_010697_020 Hb_002301_070--Hb_004143_080 Hb_002301_070--Hb_000815_120 Hb_000268_050 Hb_000268_050 Hb_002329_050--Hb_000268_050 Hb_002329_050--Hb_000883_080 Hb_005483_040 Hb_005483_040 Hb_002329_050--Hb_005483_040 Hb_011362_010 Hb_011362_010 Hb_002329_050--Hb_011362_010 Hb_018487_040 Hb_018487_040 Hb_002329_050--Hb_018487_040 Hb_002329_050--Hb_000928_260 Hb_000098_040 Hb_000098_040 Hb_000307_100--Hb_000098_040 Hb_000329_430 Hb_000329_430 Hb_000307_100--Hb_000329_430 Hb_002809_030 Hb_002809_030 Hb_000307_100--Hb_002809_030 Hb_000352_230 Hb_000352_230 Hb_000307_100--Hb_000352_230 Hb_009771_090 Hb_009771_090 Hb_000307_100--Hb_009771_090 Hb_000307_100--Hb_010697_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0786492 1.24841 1.38659 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0468679 4.74588

CAGE analysis