Hb_006573_280

Information

Type -
Description -
Location Contig6573: 177983-179375
Sequence    

Annotation

kegg
ID rcu:RCOM_1581540
description hypothetical protein
nr
ID XP_012090160.1
description PREDICTED: probable membrane-associated kinase regulator 5 [Jatropha curcas]
swissprot
ID Q9FLX4
description Probable membrane-associated kinase regulator 5 OS=Arabidopsis thaliana GN=MAKR5 PE=2 SV=1
trembl
ID A0A067JEH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26033 PE=4 SV=1
Gene Ontology
ID GO:0006950
description probable membrane-associated kinase regulator 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52833: 177895-179079
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006573_280 0.0 - - PREDICTED: probable membrane-associated kinase regulator 5 [Jatropha curcas]
2 Hb_000054_140 0.0825242045 - - PREDICTED: MACPF domain-containing protein CAD1 [Jatropha curcas]
3 Hb_001677_120 0.0935766133 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
4 Hb_002370_060 0.0936454349 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1-like [Populus euphratica]
5 Hb_001248_170 0.0945236644 desease resistance Gene Name: NB-ARC Disease resistance protein RGA2, putative [Ricinus communis]
6 Hb_004112_050 0.0967404364 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
7 Hb_000836_220 0.0969039659 - - UDP-glucosyltransferase, putative [Ricinus communis]
8 Hb_007007_090 0.0979890601 - - phospholipase d beta, putative [Ricinus communis]
9 Hb_001310_080 0.1009169782 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
10 Hb_024650_010 0.1027961461 - - PREDICTED: BAHD acyltransferase DCR [Jatropha curcas]
11 Hb_001821_050 0.1047049997 - - hypothetical protein CICLE_v10032084mg [Citrus clementina]
12 Hb_004837_110 0.1056241914 - - PREDICTED: MATE efflux family protein 1 isoform X1 [Jatropha curcas]
13 Hb_000567_110 0.1061269265 - - hypothetical protein JCGZ_21556 [Jatropha curcas]
14 Hb_113396_010 0.1067637651 - - cytochrome P450, putative [Ricinus communis]
15 Hb_004724_300 0.1070271578 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
16 Hb_007102_010 0.1072093226 - - Granule-bound starch synthase 1, chloroplastic/amyloplastic [Gossypium arboreum]
17 Hb_002375_080 0.1156923193 - - conserved hypothetical protein [Ricinus communis]
18 Hb_028928_020 0.1179783327 - - hypothetical protein CICLE_v10018504mg [Citrus clementina]
19 Hb_000589_330 0.1182485224 - - kinase, putative [Ricinus communis]
20 Hb_002097_130 0.1189702356 - - tonoplast intrinsic protein [Hevea brasiliensis]

Gene co-expression network

sample Hb_006573_280 Hb_006573_280 Hb_000054_140 Hb_000054_140 Hb_006573_280--Hb_000054_140 Hb_001677_120 Hb_001677_120 Hb_006573_280--Hb_001677_120 Hb_002370_060 Hb_002370_060 Hb_006573_280--Hb_002370_060 Hb_001248_170 Hb_001248_170 Hb_006573_280--Hb_001248_170 Hb_004112_050 Hb_004112_050 Hb_006573_280--Hb_004112_050 Hb_000836_220 Hb_000836_220 Hb_006573_280--Hb_000836_220 Hb_000054_140--Hb_002370_060 Hb_004837_110 Hb_004837_110 Hb_000054_140--Hb_004837_110 Hb_001198_160 Hb_001198_160 Hb_000054_140--Hb_001198_160 Hb_000054_140--Hb_000836_220 Hb_033187_020 Hb_033187_020 Hb_000054_140--Hb_033187_020 Hb_002375_080 Hb_002375_080 Hb_001677_120--Hb_002375_080 Hb_001821_050 Hb_001821_050 Hb_001677_120--Hb_001821_050 Hb_007007_090 Hb_007007_090 Hb_001677_120--Hb_007007_090 Hb_004724_300 Hb_004724_300 Hb_001677_120--Hb_004724_300 Hb_004945_050 Hb_004945_050 Hb_001677_120--Hb_004945_050 Hb_177215_020 Hb_177215_020 Hb_002370_060--Hb_177215_020 Hb_002370_060--Hb_000836_220 Hb_002370_060--Hb_001248_170 Hb_002370_060--Hb_001198_160 Hb_001248_170--Hb_007007_090 Hb_008040_060 Hb_008040_060 Hb_001248_170--Hb_008040_060 Hb_000976_340 Hb_000976_340 Hb_001248_170--Hb_000976_340 Hb_002529_080 Hb_002529_080 Hb_001248_170--Hb_002529_080 Hb_001310_080 Hb_001310_080 Hb_004112_050--Hb_001310_080 Hb_004112_050--Hb_004724_300 Hb_002218_080 Hb_002218_080 Hb_004112_050--Hb_002218_080 Hb_007102_010 Hb_007102_010 Hb_004112_050--Hb_007102_010 Hb_007007_030 Hb_007007_030 Hb_004112_050--Hb_007007_030 Hb_113396_010 Hb_113396_010 Hb_004112_050--Hb_113396_010 Hb_000836_220--Hb_001198_160 Hb_000836_220--Hb_177215_020 Hb_000028_330 Hb_000028_330 Hb_000836_220--Hb_000028_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 19.7039 7.70456 11.4196 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0889999 0 2.84907 5.29754

CAGE analysis