Hb_006573_310

Information

Type -
Description -
Location Contig6573: 209310-211784
Sequence    

Annotation

kegg
ID rcu:RCOM_1581510
description Tellurite resistance protein tehA, putative
nr
ID XP_002513622.1
description Tellurite resistance protein tehA, putative [Ricinus communis]
swissprot
ID Q9FLV9
description S-type anion channel SLAH3 OS=Arabidopsis thaliana GN=SLAH3 PE=1 SV=1
trembl
ID B9RIQ3
description Tellurite resistance protein tehA, putative OS=Ricinus communis GN=RCOM_1581510 PE=4 SV=1
Gene Ontology
ID GO:0005623
description s-type anion channel slah2-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52838: 209706-210172 , PASA_asmbl_52839: 210446-210861 , PASA_asmbl_52840: 210969-211464
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006573_310 0.0 - - Tellurite resistance protein tehA, putative [Ricinus communis]
2 Hb_004774_080 0.0773820382 - - conserved hypothetical protein [Ricinus communis]
3 Hb_007245_030 0.0786079493 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005914_100 0.0820643299 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004241_160 0.0844760834 - - PREDICTED: receptor-like serine/threonine-protein kinase SD1-7 [Jatropha curcas]
6 Hb_078448_010 0.0866190135 - - hypothetical protein L484_017526 [Morus notabilis]
7 Hb_000527_020 0.0868395447 - - PREDICTED: uncharacterized protein LOC105649490 [Jatropha curcas]
8 Hb_000056_290 0.0883439015 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004225_160 0.0906553023 - - PREDICTED: kiwellin-like [Jatropha curcas]
10 Hb_056196_020 0.0922721255 - - PREDICTED: uncharacterized protein LOC105631532 isoform X1 [Jatropha curcas]
11 Hb_004097_030 0.0937565852 - - PREDICTED: uncharacterized protein LOC105634518 [Jatropha curcas]
12 Hb_000890_140 0.0973189866 - - PREDICTED: uncharacterized protein LOC105646185 [Jatropha curcas]
13 Hb_000162_160 0.0984274528 - - PREDICTED: auxin transporter-like protein 5 [Populus euphratica]
14 Hb_005398_050 0.0996798354 - - PREDICTED: uncharacterized protein LOC105644215 isoform X1 [Jatropha curcas]
15 Hb_118282_020 0.1011582929 - - PREDICTED: uncharacterized protein LOC105631532 isoform X3 [Jatropha curcas]
16 Hb_034420_010 0.1016996655 - - glutathione S-transferase [Caragana korshinskii]
17 Hb_009113_060 0.1029277664 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000116_050 0.1032184705 - - PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Jatropha curcas]
19 Hb_000160_110 0.1054112915 - - PREDICTED: uncharacterized protein LOC100253584 [Vitis vinifera]
20 Hb_000134_300 0.1056242925 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_006573_310 Hb_006573_310 Hb_004774_080 Hb_004774_080 Hb_006573_310--Hb_004774_080 Hb_007245_030 Hb_007245_030 Hb_006573_310--Hb_007245_030 Hb_005914_100 Hb_005914_100 Hb_006573_310--Hb_005914_100 Hb_004241_160 Hb_004241_160 Hb_006573_310--Hb_004241_160 Hb_078448_010 Hb_078448_010 Hb_006573_310--Hb_078448_010 Hb_000527_020 Hb_000527_020 Hb_006573_310--Hb_000527_020 Hb_118282_020 Hb_118282_020 Hb_004774_080--Hb_118282_020 Hb_000134_300 Hb_000134_300 Hb_004774_080--Hb_000134_300 Hb_003680_180 Hb_003680_180 Hb_004774_080--Hb_003680_180 Hb_034420_010 Hb_034420_010 Hb_004774_080--Hb_034420_010 Hb_004774_080--Hb_000527_020 Hb_007245_030--Hb_005914_100 Hb_000614_200 Hb_000614_200 Hb_007245_030--Hb_000614_200 Hb_001168_030 Hb_001168_030 Hb_007245_030--Hb_001168_030 Hb_000316_070 Hb_000316_070 Hb_007245_030--Hb_000316_070 Hb_002928_150 Hb_002928_150 Hb_007245_030--Hb_002928_150 Hb_004225_160 Hb_004225_160 Hb_007245_030--Hb_004225_160 Hb_004097_030 Hb_004097_030 Hb_005914_100--Hb_004097_030 Hb_005914_100--Hb_002928_150 Hb_004174_030 Hb_004174_030 Hb_005914_100--Hb_004174_030 Hb_003398_050 Hb_003398_050 Hb_005914_100--Hb_003398_050 Hb_056196_020 Hb_056196_020 Hb_005914_100--Hb_056196_020 Hb_000160_110 Hb_000160_110 Hb_004241_160--Hb_000160_110 Hb_008226_050 Hb_008226_050 Hb_004241_160--Hb_008226_050 Hb_004241_160--Hb_005914_100 Hb_000527_030 Hb_000527_030 Hb_004241_160--Hb_000527_030 Hb_003641_040 Hb_003641_040 Hb_004241_160--Hb_003641_040 Hb_005398_050 Hb_005398_050 Hb_078448_010--Hb_005398_050 Hb_078448_010--Hb_000527_020 Hb_000056_290 Hb_000056_290 Hb_078448_010--Hb_000056_290 Hb_078448_010--Hb_118282_020 Hb_078448_010--Hb_004774_080 Hb_000890_140 Hb_000890_140 Hb_000527_020--Hb_000890_140 Hb_000527_020--Hb_005398_050 Hb_128392_010 Hb_128392_010 Hb_000527_020--Hb_128392_010 Hb_021576_050 Hb_021576_050 Hb_000527_020--Hb_021576_050 Hb_001390_040 Hb_001390_040 Hb_000527_020--Hb_001390_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0246572 0.839755 0.457898 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.014169 0.0376295

CAGE analysis