Hb_006588_030

Information

Type -
Description -
Location Contig6588: 22045-24327
Sequence    

Annotation

kegg
ID rcu:RCOM_1172950
description cytochrome P450, putative (EC:1.3.3.9)
nr
ID XP_012088220.1
description PREDICTED: cytochrome P450 CYP72A219-like [Jatropha curcas]
swissprot
ID Q9LUC5
description Cytochrome P450 72A15 OS=Arabidopsis thaliana GN=CYP72A15 PE=2 SV=1
trembl
ID A0A067JJD9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25743 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp72a219-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52865: 22251-23342 , PASA_asmbl_52866: 23399-23832 , PASA_asmbl_52867: 23860-24194
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006588_030 0.0 - - PREDICTED: cytochrome P450 CYP72A219-like [Jatropha curcas]
2 Hb_000958_030 0.154894326 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
3 Hb_002072_020 0.1806885799 - - hypothetical protein JCGZ_16057 [Jatropha curcas]
4 Hb_157263_010 0.210169944 - - PREDICTED: monomethylxanthine methyltransferase 2-like isoform X4 [Jatropha curcas]
5 Hb_048476_010 0.2134832157 - - PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Citrus sinensis]
6 Hb_000003_510 0.2242710501 - - PREDICTED: uncharacterized protein LOC105631555 [Jatropha curcas]
7 Hb_000083_130 0.2294144143 - - hypothetical protein RCOM_0884570 [Ricinus communis]
8 Hb_010175_060 0.231426787 - - conserved hypothetical protein [Ricinus communis]
9 Hb_080147_060 0.2339827138 - - PREDICTED: cyclin-dependent kinase F-1 isoform X1 [Jatropha curcas]
10 Hb_001863_200 0.2398205839 - - chloroplast 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase [Hevea brasiliensis]
11 Hb_001493_020 0.2424640603 - - leucine-rich repeat receptor-like protein kinase [Manihot esculenta]
12 Hb_029977_010 0.2461125687 - - catalytic, putative [Ricinus communis]
13 Hb_000976_440 0.2464328263 - - UDP-glucosyltransferase, putative [Ricinus communis]
14 Hb_000077_330 0.2470072526 - - PREDICTED: bifunctional epoxide hydrolase 2-like [Jatropha curcas]
15 Hb_000364_200 0.2474085347 - - o-methyltransferase, putative [Ricinus communis]
16 Hb_000580_070 0.2567593489 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
17 Hb_020378_010 0.26352182 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
18 Hb_001963_020 0.2637866938 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
19 Hb_001959_030 0.263916972 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000915_070 0.2640901089 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_006588_030 Hb_006588_030 Hb_000958_030 Hb_000958_030 Hb_006588_030--Hb_000958_030 Hb_002072_020 Hb_002072_020 Hb_006588_030--Hb_002072_020 Hb_157263_010 Hb_157263_010 Hb_006588_030--Hb_157263_010 Hb_048476_010 Hb_048476_010 Hb_006588_030--Hb_048476_010 Hb_000003_510 Hb_000003_510 Hb_006588_030--Hb_000003_510 Hb_000083_130 Hb_000083_130 Hb_006588_030--Hb_000083_130 Hb_000958_030--Hb_002072_020 Hb_000077_330 Hb_000077_330 Hb_000958_030--Hb_000077_330 Hb_000976_440 Hb_000976_440 Hb_000958_030--Hb_000976_440 Hb_018591_050 Hb_018591_050 Hb_000958_030--Hb_018591_050 Hb_032050_050 Hb_032050_050 Hb_000958_030--Hb_032050_050 Hb_002072_020--Hb_000003_510 Hb_002072_020--Hb_000976_440 Hb_002072_020--Hb_048476_010 Hb_002072_020--Hb_032050_050 Hb_002072_020--Hb_000077_330 Hb_009823_010 Hb_009823_010 Hb_002072_020--Hb_009823_010 Hb_010175_060 Hb_010175_060 Hb_157263_010--Hb_010175_060 Hb_050241_010 Hb_050241_010 Hb_157263_010--Hb_050241_010 Hb_000189_490 Hb_000189_490 Hb_157263_010--Hb_000189_490 Hb_001493_170 Hb_001493_170 Hb_157263_010--Hb_001493_170 Hb_004122_030 Hb_004122_030 Hb_157263_010--Hb_004122_030 Hb_027634_010 Hb_027634_010 Hb_048476_010--Hb_027634_010 Hb_001921_020 Hb_001921_020 Hb_048476_010--Hb_001921_020 Hb_001640_020 Hb_001640_020 Hb_048476_010--Hb_001640_020 Hb_001959_030 Hb_001959_030 Hb_048476_010--Hb_001959_030 Hb_048476_010--Hb_004122_030 Hb_001963_020 Hb_001963_020 Hb_000003_510--Hb_001963_020 Hb_001369_620 Hb_001369_620 Hb_000003_510--Hb_001369_620 Hb_000276_030 Hb_000276_030 Hb_000003_510--Hb_000276_030 Hb_001470_040 Hb_001470_040 Hb_000003_510--Hb_001470_040 Hb_010174_170 Hb_010174_170 Hb_000003_510--Hb_010174_170 Hb_010253_020 Hb_010253_020 Hb_000083_130--Hb_010253_020 Hb_001625_010 Hb_001625_010 Hb_000083_130--Hb_001625_010 Hb_001900_060 Hb_001900_060 Hb_000083_130--Hb_001900_060 Hb_159411_010 Hb_159411_010 Hb_000083_130--Hb_159411_010 Hb_000778_020 Hb_000778_020 Hb_000083_130--Hb_000778_020 Hb_000413_230 Hb_000413_230 Hb_000083_130--Hb_000413_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.33989 3.03796 0.893735 4.67209 0.104287 1.66138
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0195218 0 14.5127 1.44018

CAGE analysis