Hb_006594_060

Information

Type transcription factor
Description TF Family: HSF
Location Contig6594: 92094-95145
Sequence    

Annotation

kegg
ID vvi:100247320
description heat shock factor protein HSF24
nr
ID XP_012079229.1
description PREDICTED: heat shock factor protein HSF24 [Jatropha curcas]
swissprot
ID P22335
description Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1
trembl
ID A0A067KI29
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12391 PE=3 SV=1
Gene Ontology
ID GO:0005634
description heat shock factor protein hsf24

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_52908: 92171-95138
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006594_060 0.0 transcription factor TF Family: HSF PREDICTED: heat shock factor protein HSF24 [Jatropha curcas]
2 Hb_000811_010 0.1010799344 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF118 [Jatropha curcas]
3 Hb_022501_020 0.115893077 - - AMP dependent CoA ligase, putative [Ricinus communis]
4 Hb_000527_140 0.1263138519 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
5 Hb_000963_200 0.1330272082 - - beta-galactosidase, putative [Ricinus communis]
6 Hb_082683_010 0.1339206831 - - PREDICTED: uncharacterized protein LOC104898613 [Beta vulgaris subsp. vulgaris]
7 Hb_006316_030 0.1400359835 - - aldehyde oxidase, putative [Ricinus communis]
8 Hb_006241_010 0.1403726544 desease resistance Gene Name: NB-ARC Disease resistance protein RFL1, putative [Ricinus communis]
9 Hb_002420_010 0.140941286 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
10 Hb_004044_030 0.1426499557 - - PREDICTED: uncharacterized protein LOC105639335 [Jatropha curcas]
11 Hb_182021_010 0.1513871509 - - sucrose transporter 4 [Hevea brasiliensis]
12 Hb_000236_050 0.151468051 - - phosphate transporter [Manihot esculenta]
13 Hb_000236_110 0.1514989303 - - PREDICTED: chaperone protein dnaJ 20, chloroplastic [Jatropha curcas]
14 Hb_002551_090 0.1524415755 - - hypothetical protein JCGZ_17224 [Jatropha curcas]
15 Hb_009785_010 0.1534615093 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
16 Hb_000034_030 0.1562859207 - - protein phosphatase 2c, putative [Ricinus communis]
17 Hb_002750_010 0.1569781221 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
18 Hb_000020_030 0.158196921 - - protein binding protein, putative [Ricinus communis]
19 Hb_000816_020 0.1600201797 desease resistance Gene Name: NB-ARC unnamed protein product [Coffea canephora]
20 Hb_003453_030 0.1607223728 - - hypothetical protein JCGZ_26893 [Jatropha curcas]

Gene co-expression network

sample Hb_006594_060 Hb_006594_060 Hb_000811_010 Hb_000811_010 Hb_006594_060--Hb_000811_010 Hb_022501_020 Hb_022501_020 Hb_006594_060--Hb_022501_020 Hb_000527_140 Hb_000527_140 Hb_006594_060--Hb_000527_140 Hb_000963_200 Hb_000963_200 Hb_006594_060--Hb_000963_200 Hb_082683_010 Hb_082683_010 Hb_006594_060--Hb_082683_010 Hb_006316_030 Hb_006316_030 Hb_006594_060--Hb_006316_030 Hb_000811_010--Hb_082683_010 Hb_002420_010 Hb_002420_010 Hb_000811_010--Hb_002420_010 Hb_000816_020 Hb_000816_020 Hb_000811_010--Hb_000816_020 Hb_000811_010--Hb_000527_140 Hb_000793_040 Hb_000793_040 Hb_000811_010--Hb_000793_040 Hb_006241_010 Hb_006241_010 Hb_022501_020--Hb_006241_010 Hb_012807_060 Hb_012807_060 Hb_022501_020--Hb_012807_060 Hb_003453_030 Hb_003453_030 Hb_022501_020--Hb_003453_030 Hb_002551_090 Hb_002551_090 Hb_022501_020--Hb_002551_090 Hb_004044_030 Hb_004044_030 Hb_022501_020--Hb_004044_030 Hb_114684_010 Hb_114684_010 Hb_000527_140--Hb_114684_010 Hb_064985_010 Hb_064985_010 Hb_000527_140--Hb_064985_010 Hb_002660_040 Hb_002660_040 Hb_000527_140--Hb_002660_040 Hb_042202_020 Hb_042202_020 Hb_000527_140--Hb_042202_020 Hb_001008_110 Hb_001008_110 Hb_000527_140--Hb_001008_110 Hb_000847_020 Hb_000847_020 Hb_000527_140--Hb_000847_020 Hb_000034_030 Hb_000034_030 Hb_000963_200--Hb_000034_030 Hb_029584_090 Hb_029584_090 Hb_000963_200--Hb_029584_090 Hb_032631_050 Hb_032631_050 Hb_000963_200--Hb_032631_050 Hb_000963_200--Hb_003453_030 Hb_011200_020 Hb_011200_020 Hb_000963_200--Hb_011200_020 Hb_082683_010--Hb_002420_010 Hb_001268_300 Hb_001268_300 Hb_082683_010--Hb_001268_300 Hb_082683_010--Hb_000816_020 Hb_082683_010--Hb_000527_140 Hb_002003_040 Hb_002003_040 Hb_082683_010--Hb_002003_040 Hb_001677_230 Hb_001677_230 Hb_082683_010--Hb_001677_230 Hb_038777_010 Hb_038777_010 Hb_006316_030--Hb_038777_010 Hb_003106_210 Hb_003106_210 Hb_006316_030--Hb_003106_210 Hb_001862_060 Hb_001862_060 Hb_006316_030--Hb_001862_060 Hb_001894_040 Hb_001894_040 Hb_006316_030--Hb_001894_040 Hb_001636_010 Hb_001636_010 Hb_006316_030--Hb_001636_010 Hb_001085_230 Hb_001085_230 Hb_006316_030--Hb_001085_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.899403 52.9711 11.5905 34.7058 0.837848 0.615087
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.30999 5.45211 2.4995 78.0836 27.2992

CAGE analysis