Hb_006615_110

Information

Type transcription factor
Description TF Family: bZIP
Location Contig6615: 65038-65340
Sequence    

Annotation

kegg
ID rcu:RCOM_1466940
description DNA binding protein, putative
nr
ID KDP31401.1
description hypothetical protein JCGZ_11777 [Jatropha curcas]
swissprot
ID Q9FMC2
description Basic leucine zipper 43 OS=Arabidopsis thaliana GN=BZIP43 PE=1 SV=1
trembl
ID A0A067K596
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11777 PE=4 SV=1
Gene Ontology
ID GO:0005634
description bzip transcription factor family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53034: 64810-65241
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006615_110 0.0 transcription factor TF Family: bZIP hypothetical protein JCGZ_11777 [Jatropha curcas]
2 Hb_000988_010 0.0858633331 - - hypothetical protein POPTR_0004s17730g [Populus trichocarpa]
3 Hb_045985_010 0.1184954981 - - hypothetical protein JCGZ_00291 [Jatropha curcas]
4 Hb_007125_020 0.1390051971 - - hypothetical protein POPTR_0003s18010g [Populus trichocarpa]
5 Hb_008196_010 0.1572500948 - - unnamed protein product [Coffea canephora]
6 Hb_019733_020 0.1584225739 - - hypothetical protein POPTR_0003s15470g [Populus trichocarpa]
7 Hb_187739_010 0.1760327174 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
8 Hb_011120_030 0.1852419324 - - PREDICTED: uncharacterized protein LOC105638239 [Jatropha curcas]
9 Hb_000352_020 0.1859780077 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor LEP [Jatropha curcas]
10 Hb_003878_130 0.189810646 - - -
11 Hb_001006_080 0.1914484126 - - hypothetical protein JCGZ_04862 [Jatropha curcas]
12 Hb_005428_010 0.191847037 - - cytochrome P450, putative [Ricinus communis]
13 Hb_009838_030 0.1929609115 - - Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
14 Hb_104362_020 0.1932622125 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
15 Hb_179367_010 0.1948522354 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
16 Hb_002014_120 0.1979185788 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP8 [Populus euphratica]
17 Hb_003073_060 0.1995249971 - - -
18 Hb_151027_010 0.200807983 - - (+)-delta-cadinene synthase isozyme A, putative [Ricinus communis]
19 Hb_004652_040 0.2015368909 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
20 Hb_001518_050 0.2027980136 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_006615_110 Hb_006615_110 Hb_000988_010 Hb_000988_010 Hb_006615_110--Hb_000988_010 Hb_045985_010 Hb_045985_010 Hb_006615_110--Hb_045985_010 Hb_007125_020 Hb_007125_020 Hb_006615_110--Hb_007125_020 Hb_008196_010 Hb_008196_010 Hb_006615_110--Hb_008196_010 Hb_019733_020 Hb_019733_020 Hb_006615_110--Hb_019733_020 Hb_187739_010 Hb_187739_010 Hb_006615_110--Hb_187739_010 Hb_000988_010--Hb_045985_010 Hb_000988_010--Hb_187739_010 Hb_000988_010--Hb_019733_020 Hb_002675_210 Hb_002675_210 Hb_000988_010--Hb_002675_210 Hb_001518_050 Hb_001518_050 Hb_000988_010--Hb_001518_050 Hb_001862_080 Hb_001862_080 Hb_045985_010--Hb_001862_080 Hb_045985_010--Hb_187739_010 Hb_002805_100 Hb_002805_100 Hb_045985_010--Hb_002805_100 Hb_045985_010--Hb_002675_210 Hb_009838_030 Hb_009838_030 Hb_007125_020--Hb_009838_030 Hb_001948_100 Hb_001948_100 Hb_007125_020--Hb_001948_100 Hb_002014_120 Hb_002014_120 Hb_007125_020--Hb_002014_120 Hb_000352_020 Hb_000352_020 Hb_007125_020--Hb_000352_020 Hb_004652_040 Hb_004652_040 Hb_007125_020--Hb_004652_040 Hb_003337_010 Hb_003337_010 Hb_007125_020--Hb_003337_010 Hb_008196_010--Hb_007125_020 Hb_104362_020 Hb_104362_020 Hb_008196_010--Hb_104362_020 Hb_179367_010 Hb_179367_010 Hb_008196_010--Hb_179367_010 Hb_151027_010 Hb_151027_010 Hb_008196_010--Hb_151027_010 Hb_008196_010--Hb_002014_120 Hb_000174_130 Hb_000174_130 Hb_008196_010--Hb_000174_130 Hb_048987_020 Hb_048987_020 Hb_019733_020--Hb_048987_020 Hb_071433_010 Hb_071433_010 Hb_019733_020--Hb_071433_010 Hb_000039_080 Hb_000039_080 Hb_019733_020--Hb_000039_080 Hb_087314_010 Hb_087314_010 Hb_019733_020--Hb_087314_010 Hb_036602_010 Hb_036602_010 Hb_019733_020--Hb_036602_010 Hb_172983_010 Hb_172983_010 Hb_187739_010--Hb_172983_010 Hb_002163_070 Hb_002163_070 Hb_187739_010--Hb_002163_070 Hb_010252_010 Hb_010252_010 Hb_187739_010--Hb_010252_010 Hb_009083_020 Hb_009083_020 Hb_187739_010--Hb_009083_020 Hb_160950_010 Hb_160950_010 Hb_187739_010--Hb_160950_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.318342 0.422076 1.42133 0.145815 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis