Hb_006615_190

Information

Type -
Description -
Location Contig6615: 109751-111166
Sequence    

Annotation

kegg
ID rcu:RCOM_1466990
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID AFJ53022.1
description UDP-glycosyltransferase 1 [Linum usitatissimum]
swissprot
ID Q9LZD8
description UDP-glycosyltransferase 89A2 OS=Arabidopsis thaliana GN=UGT89A2 PE=2 SV=1
trembl
ID I2BHC6
description UDP-glycosyltransferase 1 OS=Linum usitatissimum GN=UGT89B3 PE=3 SV=1
Gene Ontology
ID GO:0047213
description udp-glycosyltransferase 89b1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006615_190 0.0 - - UDP-glycosyltransferase 1 [Linum usitatissimum]
2 Hb_007237_090 0.0500592639 - - conserved hypothetical protein [Ricinus communis]
3 Hb_084127_010 0.0729887988 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_000579_220 0.0787211303 - - transcription factor, putative [Ricinus communis]
5 Hb_000072_160 0.0789000473 - - proline oxidase [Manihot esculenta]
6 Hb_000172_010 0.0916769082 - - PREDICTED: uncharacterized protein DDB_G0271670-like isoform X1 [Populus euphratica]
7 Hb_002329_030 0.097452926 - - PREDICTED: pleiotropic drug resistance protein 2-like isoform X1 [Jatropha curcas]
8 Hb_002272_070 0.0974888446 - - PREDICTED: keratin, type I cytoskeletal 9 [Jatropha curcas]
9 Hb_003439_020 0.1148966423 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Solanum lycopersicum]
10 Hb_002239_020 0.1152552604 - - MLO, putative [Theobroma cacao]
11 Hb_002968_010 0.1176323328 - - PREDICTED: pectinesterase [Jatropha curcas]
12 Hb_000521_210 0.1182429766 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
13 Hb_126466_010 0.1190093372 - - alcohol dehydrogenase, putative [Ricinus communis]
14 Hb_145139_010 0.1236915858 - - PREDICTED: sugar transporter ERD6-like 5 isoform X1 [Vitis vinifera]
15 Hb_014361_130 0.1254430342 - - PREDICTED: uncharacterized protein LOC105639824 [Jatropha curcas]
16 Hb_043939_010 0.1355563579 - - hypothetical protein B456_N011100 [Gossypium raimondii]
17 Hb_074312_020 0.1357291514 - - cytochrome P450, putative [Ricinus communis]
18 Hb_002783_300 0.1361309679 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
19 Hb_011470_010 0.1375465598 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
20 Hb_009581_040 0.1386565911 - - hypothetical protein B456_011G052100 [Gossypium raimondii]

Gene co-expression network

sample Hb_006615_190 Hb_006615_190 Hb_007237_090 Hb_007237_090 Hb_006615_190--Hb_007237_090 Hb_084127_010 Hb_084127_010 Hb_006615_190--Hb_084127_010 Hb_000579_220 Hb_000579_220 Hb_006615_190--Hb_000579_220 Hb_000072_160 Hb_000072_160 Hb_006615_190--Hb_000072_160 Hb_000172_010 Hb_000172_010 Hb_006615_190--Hb_000172_010 Hb_002329_030 Hb_002329_030 Hb_006615_190--Hb_002329_030 Hb_007237_090--Hb_084127_010 Hb_007237_090--Hb_000579_220 Hb_007237_090--Hb_000072_160 Hb_007237_090--Hb_000172_010 Hb_000521_210 Hb_000521_210 Hb_007237_090--Hb_000521_210 Hb_084127_010--Hb_000579_220 Hb_084127_010--Hb_000521_210 Hb_074312_020 Hb_074312_020 Hb_084127_010--Hb_074312_020 Hb_020648_020 Hb_020648_020 Hb_084127_010--Hb_020648_020 Hb_000579_220--Hb_000172_010 Hb_000579_220--Hb_020648_020 Hb_000579_220--Hb_000521_210 Hb_002272_070 Hb_002272_070 Hb_000072_160--Hb_002272_070 Hb_000072_160--Hb_002329_030 Hb_145139_010 Hb_145139_010 Hb_000072_160--Hb_145139_010 Hb_002968_010 Hb_002968_010 Hb_000072_160--Hb_002968_010 Hb_014361_130 Hb_014361_130 Hb_000072_160--Hb_014361_130 Hb_001879_050 Hb_001879_050 Hb_000172_010--Hb_001879_050 Hb_000172_010--Hb_000072_160 Hb_000172_010--Hb_084127_010 Hb_002329_030--Hb_002272_070 Hb_000007_210 Hb_000007_210 Hb_002329_030--Hb_000007_210 Hb_002329_030--Hb_014361_130 Hb_002329_030--Hb_084127_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0186454 3.31141 0.241479 1.16633 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.30337 0.761218

CAGE analysis