Hb_006637_050

Information

Type -
Description -
Location Contig6637: 30062-39703
Sequence    

Annotation

kegg
ID rcu:RCOM_1355490
description ethylene insensitive protein, putative
nr
ID XP_012082372.1
description PREDICTED: ethylene-insensitive protein 2 [Jatropha curcas]
swissprot
ID Q9S814
description Ethylene-insensitive protein 2 OS=Arabidopsis thaliana GN=EIN2 PE=1 SV=1
trembl
ID A0A067KA15
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16519 PE=4 SV=1
Gene Ontology
ID GO:0016020
description ethylene-insensitive protein 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53124: 29763-39625
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006637_050 0.0 - - PREDICTED: ethylene-insensitive protein 2 [Jatropha curcas]
2 Hb_014267_010 0.0741796162 - - PREDICTED: dnaJ homolog subfamily C GRV2 isoform X1 [Jatropha curcas]
3 Hb_017987_020 0.0773400117 - - conserved hypothetical protein [Ricinus communis]
4 Hb_001967_030 0.0785834607 - - PREDICTED: uncharacterized protein LOC105633557 [Jatropha curcas]
5 Hb_010417_050 0.0860012153 - - PREDICTED: uncharacterized protein LOC105645746 [Jatropha curcas]
6 Hb_000028_280 0.0874316944 transcription factor TF Family: NF-X1 PREDICTED: NF-X1-type zinc finger protein NFXL1 [Jatropha curcas]
7 Hb_002740_110 0.0880986054 - - PREDICTED: phytochrome A [Jatropha curcas]
8 Hb_002701_040 0.088959478 - - PREDICTED: auxin transport protein BIG [Jatropha curcas]
9 Hb_003605_110 0.0897070112 - - PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Jatropha curcas]
10 Hb_000796_030 0.090228635 - - PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Jatropha curcas]
11 Hb_025194_040 0.0910328289 - - PREDICTED: uncharacterized protein LOC105644854 isoform X2 [Jatropha curcas]
12 Hb_000343_120 0.0963919046 - - PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Jatropha curcas]
13 Hb_001913_060 0.0970704164 - - PREDICTED: splicing factor 3B subunit 3-like [Jatropha curcas]
14 Hb_004032_380 0.0986851299 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Jatropha curcas]
15 Hb_003988_010 0.1001125478 - - PREDICTED: vacuolar-sorting receptor 3 [Jatropha curcas]
16 Hb_000540_060 0.1012368812 - - PREDICTED: uncharacterized protein LOC105628177 [Jatropha curcas]
17 Hb_004117_310 0.102094554 - - PREDICTED: uncharacterized protein LOC105648043 [Jatropha curcas]
18 Hb_004228_010 0.1022644313 - - PREDICTED: BEACH domain-containing protein lvsA [Jatropha curcas]
19 Hb_000796_040 0.102848965 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
20 Hb_002053_080 0.1029022073 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21300 [Jatropha curcas]

Gene co-expression network

sample Hb_006637_050 Hb_006637_050 Hb_014267_010 Hb_014267_010 Hb_006637_050--Hb_014267_010 Hb_017987_020 Hb_017987_020 Hb_006637_050--Hb_017987_020 Hb_001967_030 Hb_001967_030 Hb_006637_050--Hb_001967_030 Hb_010417_050 Hb_010417_050 Hb_006637_050--Hb_010417_050 Hb_000028_280 Hb_000028_280 Hb_006637_050--Hb_000028_280 Hb_002740_110 Hb_002740_110 Hb_006637_050--Hb_002740_110 Hb_012656_030 Hb_012656_030 Hb_014267_010--Hb_012656_030 Hb_000318_390 Hb_000318_390 Hb_014267_010--Hb_000318_390 Hb_014267_010--Hb_001967_030 Hb_000796_030 Hb_000796_030 Hb_014267_010--Hb_000796_030 Hb_004228_010 Hb_004228_010 Hb_014267_010--Hb_004228_010 Hb_014267_010--Hb_010417_050 Hb_132697_010 Hb_132697_010 Hb_017987_020--Hb_132697_010 Hb_017987_020--Hb_000796_030 Hb_183963_030 Hb_183963_030 Hb_017987_020--Hb_183963_030 Hb_002188_110 Hb_002188_110 Hb_017987_020--Hb_002188_110 Hb_017987_020--Hb_010417_050 Hb_000540_060 Hb_000540_060 Hb_001967_030--Hb_000540_060 Hb_000960_100 Hb_000960_100 Hb_001967_030--Hb_000960_100 Hb_000890_050 Hb_000890_050 Hb_001967_030--Hb_000890_050 Hb_001967_030--Hb_183963_030 Hb_000321_150 Hb_000321_150 Hb_001967_030--Hb_000321_150 Hb_003988_010 Hb_003988_010 Hb_010417_050--Hb_003988_010 Hb_010417_050--Hb_004228_010 Hb_001199_100 Hb_001199_100 Hb_010417_050--Hb_001199_100 Hb_000101_240 Hb_000101_240 Hb_010417_050--Hb_000101_240 Hb_001700_040 Hb_001700_040 Hb_010417_050--Hb_001700_040 Hb_000343_120 Hb_000343_120 Hb_000028_280--Hb_000343_120 Hb_000028_280--Hb_002740_110 Hb_004143_130 Hb_004143_130 Hb_000028_280--Hb_004143_130 Hb_003605_110 Hb_003605_110 Hb_000028_280--Hb_003605_110 Hb_003253_040 Hb_003253_040 Hb_000028_280--Hb_003253_040 Hb_004994_220 Hb_004994_220 Hb_000028_280--Hb_004994_220 Hb_002740_110--Hb_003253_040 Hb_010174_110 Hb_010174_110 Hb_002740_110--Hb_010174_110 Hb_002740_110--Hb_004994_220 Hb_004032_380 Hb_004032_380 Hb_002740_110--Hb_004032_380 Hb_002740_110--Hb_004143_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.6695 31.4161 4.88681 17.4325 33.9177 29.2198
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.3139 12.4698 30.6213 19.9843 19.5023

CAGE analysis