Hb_006651_010

Information

Type -
Description -
Location Contig6651: 6175-8725
Sequence    

Annotation

kegg
ID cit:102619136
description protein disulfide isomerase-like 1-4-like
nr
ID XP_006485839.1
description PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]
swissprot
ID A3KPF5
description Protein disulfide isomerase-like 1-5 OS=Arabidopsis thaliana GN=PDIL1-5 PE=2 SV=1
trembl
ID V4VBI9
description Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033773mg PE=4 SV=1
Gene Ontology
ID GO:0043231
description protein disulfide isomerase-like 1-4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53232: 6349-6668 , PASA_asmbl_53233: 6682-7464 , PASA_asmbl_53234: 7649-8569
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006651_010 0.0 - - PREDICTED: protein disulfide isomerase-like 1-4-like [Citrus sinensis]
2 Hb_006970_100 0.0682560287 - - UDP-glucosyltransferase, putative [Ricinus communis]
3 Hb_003060_080 0.1096036591 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1 [Jatropha curcas]
4 Hb_033622_020 0.1115787221 - - lipid binding protein, putative [Ricinus communis]
5 Hb_007382_070 0.1223256124 - - PREDICTED: MAPK-interacting and spindle-stabilizing protein-like [Jatropha curcas]
6 Hb_135554_010 0.1364907811 - - Insulin-degrading enzyme, putative [Ricinus communis]
7 Hb_001519_240 0.1377580718 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
8 Hb_002555_030 0.1396446284 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO1 [Malus domestica]
9 Hb_000661_230 0.1400082617 - - PREDICTED: zinc finger CCCH domain-containing protein 22-like isoform X2 [Jatropha curcas]
10 Hb_002928_220 0.1430898099 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
11 Hb_006569_110 0.1447405577 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000422_020 0.1485354267 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
13 Hb_025526_010 0.1488369877 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104452086 [Eucalyptus grandis]
14 Hb_018212_020 0.1548761984 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
15 Hb_000380_130 0.155841877 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]
16 Hb_006120_020 0.1576656743 - - -
17 Hb_056101_010 0.1613997447 - - hypothetical protein POPTR_0391s00200g [Populus trichocarpa]
18 Hb_000575_110 0.1654457873 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]
19 Hb_000644_040 0.1660578189 desease resistance Gene Name: NB-ARC hypothetical protein VITISV_009157 [Vitis vinifera]
20 Hb_000149_120 0.1662922601 - - PREDICTED: uncharacterized protein LOC105642119 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_006651_010 Hb_006651_010 Hb_006970_100 Hb_006970_100 Hb_006651_010--Hb_006970_100 Hb_003060_080 Hb_003060_080 Hb_006651_010--Hb_003060_080 Hb_033622_020 Hb_033622_020 Hb_006651_010--Hb_033622_020 Hb_007382_070 Hb_007382_070 Hb_006651_010--Hb_007382_070 Hb_135554_010 Hb_135554_010 Hb_006651_010--Hb_135554_010 Hb_001519_240 Hb_001519_240 Hb_006651_010--Hb_001519_240 Hb_006970_100--Hb_007382_070 Hb_002928_220 Hb_002928_220 Hb_006970_100--Hb_002928_220 Hb_006970_100--Hb_003060_080 Hb_006970_100--Hb_033622_020 Hb_006569_110 Hb_006569_110 Hb_006970_100--Hb_006569_110 Hb_003060_080--Hb_006569_110 Hb_007894_260 Hb_007894_260 Hb_003060_080--Hb_007894_260 Hb_025526_010 Hb_025526_010 Hb_003060_080--Hb_025526_010 Hb_006938_010 Hb_006938_010 Hb_003060_080--Hb_006938_010 Hb_001597_110 Hb_001597_110 Hb_033622_020--Hb_001597_110 Hb_000380_130 Hb_000380_130 Hb_033622_020--Hb_000380_130 Hb_033622_020--Hb_135554_010 Hb_074892_010 Hb_074892_010 Hb_033622_020--Hb_074892_010 Hb_000465_180 Hb_000465_180 Hb_007382_070--Hb_000465_180 Hb_029576_080 Hb_029576_080 Hb_007382_070--Hb_029576_080 Hb_007382_070--Hb_002928_220 Hb_000149_120 Hb_000149_120 Hb_007382_070--Hb_000149_120 Hb_135554_010--Hb_001519_240 Hb_135554_010--Hb_029576_080 Hb_135554_010--Hb_000465_180 Hb_010839_010 Hb_010839_010 Hb_135554_010--Hb_010839_010 Hb_135554_010--Hb_006970_100 Hb_001519_240--Hb_007382_070 Hb_001519_240--Hb_000465_180 Hb_001519_240--Hb_033622_020 Hb_001519_240--Hb_006970_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0276267 5.38778 1.47433 1.74305 0 0.0138566
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0247586 0 24.877 10.5635

CAGE analysis