Hb_006651_020

Information

Type -
Description -
Location Contig6651: 55062-72503
Sequence    

Annotation

kegg
ID rcu:RCOM_0229170
description protein disulfide isomerase, putative (EC:2.4.1.119)
nr
ID XP_012086283.1
description PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
swissprot
ID Q8VX13
description Protein disulfide isomerase-like 1-3 OS=Arabidopsis thaliana GN=PDIL1-3 PE=2 SV=1
trembl
ID A0A067L9K0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18539 PE=4 SV=1
Gene Ontology
ID GO:0005623
description protein disulfide isomerase-like 1-4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006651_020 0.0 - - PREDICTED: protein disulfide isomerase-like 1-4 [Jatropha curcas]
2 Hb_004030_040 0.0274408291 - - PREDICTED: protein NRT1/ PTR FAMILY 2.8 [Jatropha curcas]
3 Hb_153544_020 0.0452506564 transcription factor TF Family: TCP PREDICTED: transcription factor TCP12 [Jatropha curcas]
4 Hb_002757_030 0.0525747611 - - unnamed protein product [Vitis vinifera]
5 Hb_001856_250 0.0596029472 - - PREDICTED: phenolic glucoside malonyltransferase 1-like [Jatropha curcas]
6 Hb_010833_010 0.0596619625 - - hypothetical protein JCGZ_05701 [Jatropha curcas]
7 Hb_003754_010 0.0622686729 - - hypothetical protein POPTR_0019s09950g [Populus trichocarpa]
8 Hb_004957_010 0.0623614942 - - PREDICTED: probable aquaporin NIP-type [Prunus mume]
9 Hb_010327_060 0.0653756622 - - hypothetical protein B456_001G246300 [Gossypium raimondii]
10 Hb_000997_220 0.0679430048 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA14-like [Jatropha curcas]
11 Hb_009164_010 0.0699049779 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Jatropha curcas]
12 Hb_002734_020 0.0714562295 - - PREDICTED: uncharacterized protein LOC105631540 [Jatropha curcas]
13 Hb_000483_340 0.0749758686 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001308_010 0.0762396046 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002757_040 0.0817180314 - - -
16 Hb_004884_040 0.0822338818 - - hypothetical protein POPTR_0016s12910g [Populus trichocarpa]
17 Hb_027577_010 0.0853159364 - - PREDICTED: uncharacterized protein LOC104779928 [Camelina sativa]
18 Hb_000729_040 0.0872106826 - - xyloglucan endotransglucosylase/hydrolase protein 10 precursor [Populus trichocarpa]
19 Hb_000487_350 0.0884182747 - - conserved hypothetical protein [Ricinus communis]
20 Hb_019953_010 0.0933531794 - - hypothetical protein CICLE_v10019877mg [Citrus clementina]

Gene co-expression network

sample Hb_006651_020 Hb_006651_020 Hb_004030_040 Hb_004030_040 Hb_006651_020--Hb_004030_040 Hb_153544_020 Hb_153544_020 Hb_006651_020--Hb_153544_020 Hb_002757_030 Hb_002757_030 Hb_006651_020--Hb_002757_030 Hb_001856_250 Hb_001856_250 Hb_006651_020--Hb_001856_250 Hb_010833_010 Hb_010833_010 Hb_006651_020--Hb_010833_010 Hb_003754_010 Hb_003754_010 Hb_006651_020--Hb_003754_010 Hb_004030_040--Hb_002757_030 Hb_009164_010 Hb_009164_010 Hb_004030_040--Hb_009164_010 Hb_010327_060 Hb_010327_060 Hb_004030_040--Hb_010327_060 Hb_004030_040--Hb_153544_020 Hb_004030_040--Hb_001856_250 Hb_153544_020--Hb_003754_010 Hb_004957_010 Hb_004957_010 Hb_153544_020--Hb_004957_010 Hb_153544_020--Hb_010833_010 Hb_153544_020--Hb_010327_060 Hb_000997_220 Hb_000997_220 Hb_153544_020--Hb_000997_220 Hb_002757_030--Hb_009164_010 Hb_002757_030--Hb_010327_060 Hb_002757_040 Hb_002757_040 Hb_002757_030--Hb_002757_040 Hb_002757_030--Hb_153544_020 Hb_000483_340 Hb_000483_340 Hb_001856_250--Hb_000483_340 Hb_002734_020 Hb_002734_020 Hb_001856_250--Hb_002734_020 Hb_004884_040 Hb_004884_040 Hb_001856_250--Hb_004884_040 Hb_027577_010 Hb_027577_010 Hb_001856_250--Hb_027577_010 Hb_000729_040 Hb_000729_040 Hb_001856_250--Hb_000729_040 Hb_010833_010--Hb_003754_010 Hb_010833_010--Hb_004957_010 Hb_010833_010--Hb_000997_220 Hb_010833_010--Hb_010327_060 Hb_003754_010--Hb_004957_010 Hb_001308_010 Hb_001308_010 Hb_003754_010--Hb_001308_010 Hb_003754_010--Hb_000997_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0429778 0.954884 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.21529

CAGE analysis