Hb_006658_020

Information

Type -
Description -
Location Contig6658: 22995-26620
Sequence    

Annotation

kegg
ID rcu:RCOM_0623840
description hypothetical protein
nr
ID XP_012071525.1
description PREDICTED: uncharacterized protein LOC105633529 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KUR5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04046 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53237: 23387-26102
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006658_020 0.0 - - PREDICTED: uncharacterized protein LOC105633529 [Jatropha curcas]
2 Hb_001016_050 0.0611039243 - - drought-inducible protein [Manihot esculenta]
3 Hb_004452_110 0.0654746229 - - PREDICTED: uncharacterized protein LOC105639575 isoform X1 [Jatropha curcas]
4 Hb_002046_160 0.0717741434 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
5 Hb_000258_070 0.0773014418 - - PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]
6 Hb_002495_080 0.0774979722 - - PREDICTED: polygalacturonase ADPG2 [Jatropha curcas]
7 Hb_132840_110 0.0786142279 rubber biosynthesis Gene Name: Pyruvate dehydrogenase pyruvate dehydrogenase, putative [Ricinus communis]
8 Hb_000300_270 0.0802109503 - - cationic amino acid transporter, putative [Ricinus communis]
9 Hb_003517_040 0.0807058366 - - PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic [Jatropha curcas]
10 Hb_000313_220 0.081532307 - - PREDICTED: sulfhydryl oxidase 2 isoform X1 [Jatropha curcas]
11 Hb_000441_090 0.0819007856 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 2 [Jatropha curcas]
12 Hb_001922_150 0.0829448589 - - PREDICTED: WD repeat-containing protein 91 homolog isoform X1 [Jatropha curcas]
13 Hb_011609_140 0.0842902607 - - hypothetical protein JCGZ_12974 [Jatropha curcas]
14 Hb_004109_230 0.0843008711 - - heat shock protein binding protein, putative [Ricinus communis]
15 Hb_002849_130 0.0857304554 - - PREDICTED: RAB6A-GEF complex partner protein 1-like [Jatropha curcas]
16 Hb_000049_020 0.0870829833 - - Ras-GTPase-activating protein-binding protein, putative [Ricinus communis]
17 Hb_005730_040 0.0876448023 - - hypothetical protein PRUPE_ppa004338mg [Prunus persica]
18 Hb_001712_060 0.0886600915 - - PREDICTED: proline-rich receptor-like protein kinase PERK9 [Jatropha curcas]
19 Hb_000976_140 0.0888907791 - - PREDICTED: uncharacterized protein LOC105646208 isoform X1 [Jatropha curcas]
20 Hb_001109_060 0.0889838548 - - amino acid transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_006658_020 Hb_006658_020 Hb_001016_050 Hb_001016_050 Hb_006658_020--Hb_001016_050 Hb_004452_110 Hb_004452_110 Hb_006658_020--Hb_004452_110 Hb_002046_160 Hb_002046_160 Hb_006658_020--Hb_002046_160 Hb_000258_070 Hb_000258_070 Hb_006658_020--Hb_000258_070 Hb_002495_080 Hb_002495_080 Hb_006658_020--Hb_002495_080 Hb_132840_110 Hb_132840_110 Hb_006658_020--Hb_132840_110 Hb_005276_060 Hb_005276_060 Hb_001016_050--Hb_005276_060 Hb_000009_400 Hb_000009_400 Hb_001016_050--Hb_000009_400 Hb_004109_230 Hb_004109_230 Hb_001016_050--Hb_004109_230 Hb_008253_020 Hb_008253_020 Hb_001016_050--Hb_008253_020 Hb_007810_110 Hb_007810_110 Hb_001016_050--Hb_007810_110 Hb_000345_160 Hb_000345_160 Hb_004452_110--Hb_000345_160 Hb_000976_140 Hb_000976_140 Hb_004452_110--Hb_000976_140 Hb_000300_270 Hb_000300_270 Hb_004452_110--Hb_000300_270 Hb_004452_110--Hb_002046_160 Hb_005730_040 Hb_005730_040 Hb_004452_110--Hb_005730_040 Hb_000313_220 Hb_000313_220 Hb_004452_110--Hb_000313_220 Hb_002046_160--Hb_000300_270 Hb_001712_060 Hb_001712_060 Hb_002046_160--Hb_001712_060 Hb_000768_200 Hb_000768_200 Hb_002046_160--Hb_000768_200 Hb_003581_200 Hb_003581_200 Hb_002046_160--Hb_003581_200 Hb_000441_090 Hb_000441_090 Hb_000258_070--Hb_000441_090 Hb_015807_050 Hb_015807_050 Hb_000258_070--Hb_015807_050 Hb_002849_130 Hb_002849_130 Hb_000258_070--Hb_002849_130 Hb_000340_530 Hb_000340_530 Hb_000258_070--Hb_000340_530 Hb_000258_070--Hb_000313_220 Hb_000347_430 Hb_000347_430 Hb_000258_070--Hb_000347_430 Hb_005650_010 Hb_005650_010 Hb_002495_080--Hb_005650_010 Hb_000340_230 Hb_000340_230 Hb_002495_080--Hb_000340_230 Hb_002495_080--Hb_000441_090 Hb_002495_080--Hb_000258_070 Hb_000049_020 Hb_000049_020 Hb_002495_080--Hb_000049_020 Hb_000214_050 Hb_000214_050 Hb_132840_110--Hb_000214_050 Hb_001789_190 Hb_001789_190 Hb_132840_110--Hb_001789_190 Hb_000340_420 Hb_000340_420 Hb_132840_110--Hb_000340_420 Hb_000086_440 Hb_000086_440 Hb_132840_110--Hb_000086_440 Hb_001014_100 Hb_001014_100 Hb_132840_110--Hb_001014_100 Hb_002811_270 Hb_002811_270 Hb_132840_110--Hb_002811_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
22.804 22.5338 15.335 28.0075 17.6419 19.3795
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.5661 15.1655 13.227 14.1842 26.8014

CAGE analysis