Hb_006660_010

Information

Type -
Description -
Location Contig6660: 8418-14734
Sequence    

Annotation

kegg
ID rcu:RCOM_0508490
description hypothetical protein
nr
ID XP_012089843.1
description PREDICTED: exocyst complex component EXO84C isoform X1 [Jatropha curcas]
swissprot
ID Q9SY60
description Exocyst complex component EXO84C OS=Arabidopsis thaliana GN=EXO84C PE=2 SV=1
trembl
ID A0A067JIY8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02394 PE=4 SV=1
Gene Ontology
ID GO:0007267
description exocyst complex component exo84c-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53256: 8479-32024
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006660_010 0.0 - - PREDICTED: exocyst complex component EXO84C isoform X1 [Jatropha curcas]
2 Hb_007803_050 0.0619224214 - - PREDICTED: uncharacterized protein LOC105129170 isoform X2 [Populus euphratica]
3 Hb_011310_160 0.0757292678 - - PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
4 Hb_002811_060 0.0768390821 - - PREDICTED: protein transport protein Sec24-like At4g32640 [Jatropha curcas]
5 Hb_000212_310 0.0777336698 - - hypothetical protein JCGZ_24350 [Jatropha curcas]
6 Hb_007062_020 0.0777820605 - - gcn4-complementing protein, putative [Ricinus communis]
7 Hb_000592_030 0.081449093 - - PREDICTED: uncharacterized protein LOC100853969 isoform X1 [Vitis vinifera]
8 Hb_001199_100 0.0821041039 - - PREDICTED: uncharacterized protein LOC105639813 [Jatropha curcas]
9 Hb_002909_140 0.0826584496 - - PREDICTED: D-xylose-proton symporter-like 2 [Jatropha curcas]
10 Hb_002493_020 0.0826959119 - - PREDICTED: uncharacterized protein At4g26450 isoform X3 [Jatropha curcas]
11 Hb_010174_040 0.0844454394 - - PREDICTED: T-complex protein 1 subunit epsilon [Jatropha curcas]
12 Hb_001617_060 0.0848106021 - - PREDICTED: polyadenylate-binding protein RBP45B isoform X1 [Jatropha curcas]
13 Hb_000008_290 0.0850116435 - - PREDICTED: protein SAND [Jatropha curcas]
14 Hb_012022_090 0.0851785308 - - PREDICTED: LIMR family protein At5g01460 [Gossypium raimondii]
15 Hb_005679_050 0.0853865079 - - ABC transporter family protein [Hevea brasiliensis]
16 Hb_004676_010 0.0865704687 - - PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Jatropha curcas]
17 Hb_002095_010 0.0879366032 - - PREDICTED: glutamate receptor 3.7 isoform X1 [Jatropha curcas]
18 Hb_004306_080 0.0881719991 - - PREDICTED: B-cell receptor-associated protein 31 [Jatropha curcas]
19 Hb_007904_160 0.0885371012 - - PREDICTED: T-complex protein 1 subunit epsilon [Jatropha curcas]
20 Hb_000212_380 0.0889238991 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_006660_010 Hb_006660_010 Hb_007803_050 Hb_007803_050 Hb_006660_010--Hb_007803_050 Hb_011310_160 Hb_011310_160 Hb_006660_010--Hb_011310_160 Hb_002811_060 Hb_002811_060 Hb_006660_010--Hb_002811_060 Hb_000212_310 Hb_000212_310 Hb_006660_010--Hb_000212_310 Hb_007062_020 Hb_007062_020 Hb_006660_010--Hb_007062_020 Hb_000592_030 Hb_000592_030 Hb_006660_010--Hb_000592_030 Hb_002909_140 Hb_002909_140 Hb_007803_050--Hb_002909_140 Hb_000127_040 Hb_000127_040 Hb_007803_050--Hb_000127_040 Hb_012022_090 Hb_012022_090 Hb_007803_050--Hb_012022_090 Hb_007803_050--Hb_000592_030 Hb_007803_050--Hb_002811_060 Hb_000398_120 Hb_000398_120 Hb_011310_160--Hb_000398_120 Hb_003988_010 Hb_003988_010 Hb_011310_160--Hb_003988_010 Hb_025477_040 Hb_025477_040 Hb_011310_160--Hb_025477_040 Hb_010174_040 Hb_010174_040 Hb_011310_160--Hb_010174_040 Hb_002974_060 Hb_002974_060 Hb_011310_160--Hb_002974_060 Hb_002811_060--Hb_012022_090 Hb_005054_100 Hb_005054_100 Hb_002811_060--Hb_005054_100 Hb_000116_500 Hb_000116_500 Hb_002811_060--Hb_000116_500 Hb_002811_060--Hb_003988_010 Hb_000608_320 Hb_000608_320 Hb_002811_060--Hb_000608_320 Hb_002169_050 Hb_002169_050 Hb_000212_310--Hb_002169_050 Hb_007904_160 Hb_007904_160 Hb_000212_310--Hb_007904_160 Hb_000212_310--Hb_002909_140 Hb_000212_380 Hb_000212_380 Hb_000212_310--Hb_000212_380 Hb_004676_010 Hb_004676_010 Hb_000212_310--Hb_004676_010 Hb_000785_040 Hb_000785_040 Hb_007062_020--Hb_000785_040 Hb_027380_140 Hb_027380_140 Hb_007062_020--Hb_027380_140 Hb_001269_210 Hb_001269_210 Hb_007062_020--Hb_001269_210 Hb_000470_070 Hb_000470_070 Hb_007062_020--Hb_000470_070 Hb_009296_010 Hb_009296_010 Hb_007062_020--Hb_009296_010 Hb_012053_080 Hb_012053_080 Hb_007062_020--Hb_012053_080 Hb_000613_050 Hb_000613_050 Hb_000592_030--Hb_000613_050 Hb_020378_030 Hb_020378_030 Hb_000592_030--Hb_020378_030 Hb_002815_030 Hb_002815_030 Hb_000592_030--Hb_002815_030 Hb_000537_050 Hb_000537_050 Hb_000592_030--Hb_000537_050 Hb_001343_040 Hb_001343_040 Hb_000592_030--Hb_001343_040 Hb_001473_180 Hb_001473_180 Hb_000592_030--Hb_001473_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.1448 7.34501 6.76243 9.98582 11.0789 17.3024
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.83305 5.00128 13.1804 12.9275 10.8349

CAGE analysis