Hb_006683_070

Information

Type -
Description -
Location Contig6683: 55880-62936
Sequence    

Annotation

kegg
ID pop:POPTR_0001s20350g
description acid phosphatase survival protein SurE
nr
ID XP_012068957.1
description PREDICTED: uncharacterized protein LOC105631443 [Jatropha curcas]
swissprot
ID Q5HWH7
description 5'-nucleotidase SurE OS=Campylobacter jejuni (strain RM1221) GN=surE PE=3 SV=1
trembl
ID A0A067L9K5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24753 PE=3 SV=1
Gene Ontology
ID GO:0008253
description acid phosphatase survival protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53330: 56926-62971
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006683_070 0.0 - - PREDICTED: uncharacterized protein LOC105631443 [Jatropha curcas]
2 Hb_185255_010 0.060372966 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like [Jatropha curcas]
3 Hb_015934_120 0.0746462704 - - PREDICTED: callose synthase 7 [Vitis vinifera]
4 Hb_000297_120 0.0769280628 - - PREDICTED: sorting nexin 1 [Jatropha curcas]
5 Hb_001269_190 0.0791712676 - - PREDICTED: Golgi SNAP receptor complex member 1-1 [Jatropha curcas]
6 Hb_025098_010 0.0832929654 - - PREDICTED: protoheme IX farnesyltransferase, mitochondrial isoform X2 [Jatropha curcas]
7 Hb_005800_030 0.0854083349 - - PREDICTED: lysM and putative peptidoglycan-binding domain-containing protein 4-like [Jatropha curcas]
8 Hb_032920_070 0.0860200918 - - PREDICTED: zinc finger protein-like 1 homolog [Jatropha curcas]
9 Hb_015675_040 0.0877075407 - - PREDICTED: ribose-phosphate pyrophosphokinase 1 [Jatropha curcas]
10 Hb_002481_060 0.0887598594 - - PREDICTED: uncharacterized protein LOC105640851 [Jatropha curcas]
11 Hb_000240_030 0.0914989448 - - conserved hypothetical protein [Ricinus communis]
12 Hb_020390_010 0.0916420374 - - PREDICTED: expansin-A13 [Jatropha curcas]
13 Hb_001307_030 0.0916557634 - - PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Jatropha curcas]
14 Hb_000172_440 0.0940057629 - - PREDICTED: NADPH-dependent 1-acyldihydroxyacetone phosphate reductase [Jatropha curcas]
15 Hb_001662_130 0.0945205419 - - PREDICTED: bifunctional nuclease 2 isoform X1 [Jatropha curcas]
16 Hb_004951_060 0.0984339702 - - PREDICTED: uncharacterized protein LOC105634399 [Jatropha curcas]
17 Hb_000684_210 0.0988510819 - - PREDICTED: uncharacterized protein LOC105642177 [Jatropha curcas]
18 Hb_001489_110 0.098880015 - - PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like [Citrus sinensis]
19 Hb_002820_020 0.099072472 - - hypothetical protein VITISV_005587 [Vitis vinifera]
20 Hb_000483_300 0.0994776591 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic [Populus euphratica]

Gene co-expression network

sample Hb_006683_070 Hb_006683_070 Hb_185255_010 Hb_185255_010 Hb_006683_070--Hb_185255_010 Hb_015934_120 Hb_015934_120 Hb_006683_070--Hb_015934_120 Hb_000297_120 Hb_000297_120 Hb_006683_070--Hb_000297_120 Hb_001269_190 Hb_001269_190 Hb_006683_070--Hb_001269_190 Hb_025098_010 Hb_025098_010 Hb_006683_070--Hb_025098_010 Hb_005800_030 Hb_005800_030 Hb_006683_070--Hb_005800_030 Hb_185255_010--Hb_025098_010 Hb_005144_050 Hb_005144_050 Hb_185255_010--Hb_005144_050 Hb_185255_010--Hb_001269_190 Hb_001489_110 Hb_001489_110 Hb_185255_010--Hb_001489_110 Hb_001307_030 Hb_001307_030 Hb_185255_010--Hb_001307_030 Hb_001314_080 Hb_001314_080 Hb_015934_120--Hb_001314_080 Hb_015934_120--Hb_185255_010 Hb_015934_120--Hb_005144_050 Hb_015934_120--Hb_005800_030 Hb_000172_440 Hb_000172_440 Hb_015934_120--Hb_000172_440 Hb_032920_070 Hb_032920_070 Hb_000297_120--Hb_032920_070 Hb_000185_220 Hb_000185_220 Hb_000297_120--Hb_000185_220 Hb_000297_120--Hb_001307_030 Hb_006059_010 Hb_006059_010 Hb_000297_120--Hb_006059_010 Hb_002660_170 Hb_002660_170 Hb_000297_120--Hb_002660_170 Hb_002995_050 Hb_002995_050 Hb_001269_190--Hb_002995_050 Hb_001269_190--Hb_001489_110 Hb_000179_270 Hb_000179_270 Hb_001269_190--Hb_000179_270 Hb_000087_070 Hb_000087_070 Hb_001269_190--Hb_000087_070 Hb_000310_090 Hb_000310_090 Hb_025098_010--Hb_000310_090 Hb_025098_010--Hb_001307_030 Hb_025098_010--Hb_005144_050 Hb_002289_080 Hb_002289_080 Hb_025098_010--Hb_002289_080 Hb_008841_020 Hb_008841_020 Hb_025098_010--Hb_008841_020 Hb_133702_010 Hb_133702_010 Hb_005800_030--Hb_133702_010 Hb_004545_110 Hb_004545_110 Hb_005800_030--Hb_004545_110 Hb_002820_020 Hb_002820_020 Hb_005800_030--Hb_002820_020 Hb_003878_150 Hb_003878_150 Hb_005800_030--Hb_003878_150 Hb_004452_120 Hb_004452_120 Hb_005800_030--Hb_004452_120 Hb_000061_180 Hb_000061_180 Hb_005800_030--Hb_000061_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.30098 1.77392 2.53778 6.0508 1.59744 2.53959
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.42509 4.44509 2.68845 2.67325 5.94005

CAGE analysis